Literature DB >> 33457808

Complete chloroplast genome sequence of Lirianthe coco (Loureiro) N. H. Xia & C. Y. Wu (Magnoliaceae), a popular ornamental species.

Yongkang Sima1, Tao Wu1, Yupin Fu1, Jiabo Hao1, Shaoyu Chen1.   

Abstract

Lirianthe coco (Loureiro) N. H. Xia & C. Y. Wu is a popular ornamental species of Magnoliaceae. In the present study, the complete chloroplast genome (cpDNA) of L. coco was sequenced, assembled, and analyzed. The results indicated that the size of chloroplast genome of L. coco is 159,828 bp, which exhibits a typical quadripartite structure including a large single-copy (LSC) region of 87,958 bp and a small single-copy (SSC) region of 18,768 bp separated by a pair of identical inverted repeat regions (IRs) of 26,551 bp each. The genome contained 131 genes (113 unique), including 86 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). Phylogenetic analysis showed that L. coco is affinal to L. odoratissima and forms a nomophyletic group with the latter and L. delavayi.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Lirianthe coco (Loureiro) N. H. Xia & C. Y. Wu; Magnoliaceae; complete chloroplast genome; phylogenetic analysis

Year:  2020        PMID: 33457808      PMCID: PMC7783062          DOI: 10.1080/23802359.2020.1775143

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


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