Literature DB >> 33457783

The mitogenome of Pseudocrossidium replicatum, a desiccation-tolerant moss.

Miguel A Cevallos1, Gabriela Guerrero1, Selma Ríos2, Analilia Arroyo2, Miguel Angel Villalobos2, Helena Porta3.   

Abstract

Bryophytes are the earliest plant group on Earth. They are a fundamental component of many ecosystems around the World. Some of their main roles are related to soil development, water retention, and biogeochemical cycling. Bryophytes include liverworts, hornworts, and mosses. The sequencing of chloroplast and mitochondria genomes has been useful to elucidate the taxonomy of this heterogeneous plant group. To date, despite their ecological importance only 41 mosses mitogenomes have been deposited in the GenBank. Here, the complete mitochondria genome sequence of Pseudocrossidium replicatum, a moss of the Pottiaceae family isolated in Tlaxcala, Mexico, is reported. The mitochondrial genome size of P. replicatum comprises 105,495 bp and contains the groups of genes described for other bryophytes mitogenomes. Our phylogenetic analysis shows that during the evolution of the mosses' mitogenome, nad7, rps4, rpl16, and rpl10 genes were lost independently in several lineages. The complete mitogenome sequence reported here would be a useful tool for our comprehension of the evolutionary and population genetics of this group of plants.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Bryophytes; Pottiaceae; chondriome; mitochondria; next-generation sequencing

Year:  2020        PMID: 33457783      PMCID: PMC7782723          DOI: 10.1080/23802359.2020.1774436

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  7 in total

1.  Clustal Omega, accurate alignment of very large numbers of sequences.

Authors:  Fabian Sievers; Desmond G Higgins
Journal:  Methods Mol Biol       Date:  2014

2.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

3.  Establishing a time-scale for plant evolution.

Authors:  John T Clarke; Rachel C M Warnock; Philip C J Donoghue
Journal:  New Phytol       Date:  2011-07-06       Impact factor: 10.151

4.  Land plant evolutionary timeline: gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates.

Authors:  Susana Magallón; Khidir W Hilu; Dietmar Quandt
Journal:  Am J Bot       Date:  2013-02-27       Impact factor: 3.844

5.  Fragments of the earliest land plants.

Authors:  Charles H Wellman; Peter L Osterloff; Uzma Mohiuddin
Journal:  Nature       Date:  2003-09-18       Impact factor: 49.962

6.  The chloroplast genome of the desiccation-tolerant moss Pseudocrossidium replicatum (Taylor) R.H. Zander.

Authors:  Miguel A Cevallos; Gabriela Guerrero; Selma Ríos; Analilia Arroyo; Miguel Angel Villalobos; Helena Porta
Journal:  Genet Mol Biol       Date:  2019-07-18       Impact factor: 1.771

7.  Bryophyte species richness and composition along an altitudinal gradient in Gongga Mountain, China.

Authors:  Shou-Qin Sun; Yan-Hong Wu; Gen-Xu Wang; Jun Zhou; Dong Yu; Hai-Jian Bing; Ji Luo
Journal:  PLoS One       Date:  2013-03-05       Impact factor: 3.240

  7 in total
  2 in total

1.  The complete chloroplast and mitochondrial genomes of Scopelophila cataractae (Mitt.) Broth. (Pottiaceae, Bryophyta).

Authors:  Yuya Inoue; Miho Nakahara-Tsubota; Hiromi Tsubota
Journal:  Mitochondrial DNA B Resour       Date:  2021-12-29       Impact factor: 0.658

2.  Pseudocrossidium replicatum (Taylor) R.H. Zander is a fully desiccation-tolerant moss that expresses an inducible molecular mechanism in response to severe abiotic stress.

Authors:  Selma Ríos-Meléndez; Emmanuel Valadez-Hernández; Claudio Delgadillo; Maria L Luna-Guevara; Mario A Martínez-Núñez; Mishael Sánchez-Pérez; José L Martínez-Y-Pérez; Analilia Arroyo-Becerra; Luis Cárdenas; Martha Bibbins-Martínez; Ignacio E Maldonado-Mendoza; Miguel Angel Villalobos-López
Journal:  Plant Mol Biol       Date:  2021-06-29       Impact factor: 4.076

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.