Literature DB >> 33457729

Characterization of the complete mitochondrial genome of Oriental reed warbler, Acrocephalus orientalis (Aves: Passeriformes), and a comparative analysis with other Sylviidae species.

Sung Hyun Kim1, Soon Kyoo Choi2, Seungki Lee3.   

Abstract

The complete mitochondrial genome of the Oriental reed warbler, Acrocephalus orientalis, which belongs to the family Sylviidae was determined. The complete mitochondrial genome has a length of 16,971 bp and consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region. A. orientalis has a mitochondrial gene arrangement that is typical of vertebrates. Phylogenetic analysis using mitochondrial genomes of 11 related species revealed that A. orientalis is clustered with Acrocephalus scirpaceus and rooted with the other Sylviidae species. This mitochondrial genome provides an important resource for addressing taxonomic issues and studying molecular evolution.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Acrocephalus orientalis; Mitochondrial genome; Passeriformes; Sylviidae

Year:  2020        PMID： 33457729      PMCID： PMC7782597          DOI： 10.1080/23802359.2020.1756946

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  6 in total

Review 1.  Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system.

Authors:  C Saccone; C De Giorgi; C Gissi; G Pesole; A Reyes
Journal:  Gene       Date:  1999-09-30       Impact factor: 3.688

2.  Near-complete phylogeny and taxonomic revision of the world's babblers (Aves: Passeriformes).

Authors:  Tianlong Cai; Alice Cibois; Per Alström; Robert G Moyle; Jonathan D Kennedy; Shimiao Shao; Ruiying Zhang; Martin Irestedt; Per G P Ericson; Magnus Gelang; Yanhua Qu; Fumin Lei; Jon Fjeldså
Journal:  Mol Phylogenet Evol       Date:  2018-10-12       Impact factor: 4.286

3.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

4.  Bird mitochondrial gene order: insight from 3 warbler mitochondrial genomes.

Authors:  Tiratha Raj Singh; Ophir Shneor; Dorothée Huchon
Journal:  Mol Biol Evol       Date:  2008-01-04       Impact factor: 16.240

5.  Five new mitogenomes of Phylloscopus (Passeriformes, Phylloscopidae): Sequence, structure, and phylogenetic analyses.

Authors:  Cheng-He Sun; Hong-Yi Liu; Chang-Hu Lu
Journal:  Int J Biol Macromol       Date:  2019-12-30       Impact factor: 6.953

6.  tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.

Authors:  Todd M Lowe; Patricia P Chan
Journal:  Nucleic Acids Res       Date:  2016-05-12       Impact factor: 16.971
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.