Literature DB >> 33457497

Assessing the interplay between travel patterns and SARS-CoV-2 outbreak in realistic urban setting.

Rohan Patil1, Raviraj Dave2, Harsh Patel1, Viraj M Shah3, Deep Chakrabarti4, Udit Bhatia2.   

Abstract

BACKGROUND: The dense social contact networks and high mobility in congested urban areas facilitate the rapid transmission of infectious diseases. Typical mechanistic epidemiological models are either based on uniform mixing with ad-hoc contact processes or need real-time or archived population mobility data to simulate the social networks. However, the rapid and global transmission of the novel coronavirus (SARS-CoV-2) has led to unprecedented lockdowns at global and regional scales, leaving the archived datasets to limited use.
FINDINGS: While it is often hypothesized that population density is a significant driver in disease propagation, the disparate disease trajectories and infection rates exhibited by the different cities with comparable densities require a high-resolution description of the disease and its drivers. In this study, we explore the impact of creation of containment zones on travel patterns within the city. Further, we use a dynamical network-based infectious disease model to understand the key drivers of disease spread at sub-kilometer scales demonstrated in the city of Ahmedabad, India, which has been classified as a SARS-CoV-2 hotspot. We find that in addition to the contact network and population density, road connectivity patterns and ease of transit are strongly correlated with the rate of transmission of the disease. Given the limited access to real-time traffic data during lockdowns, we generate road connectivity networks using open-source imageries and travel patterns from open-source surveys and government reports. Within the proposed framework, we then analyze the relative merits of social distancing, enforced lockdowns, and enhanced testing and quarantining mitigating the disease spread. SCOPE: Our results suggest that the declaration of micro-containment zones within the city with high road network density combined with enhanced testing can help in containing the outbreaks until clinical interventions become available.
© The Author(s) 2021.

Entities:  

Keywords:  SARS CoV2; Social networks; Transportation gravity models; Transportation network

Year:  2021        PMID: 33457497      PMCID: PMC7803387          DOI: 10.1007/s41109-020-00346-3

Source DB:  PubMed          Journal:  Appl Netw Sci        ISSN: 2364-8228


  35 in total

1.  Transmission intensity and impact of control policies on the foot and mouth epidemic in Great Britain.

Authors:  N M Ferguson; C A Donnelly; R M Anderson
Journal:  Nature       Date:  2001-10-04       Impact factor: 49.962

2.  Modelling disease outbreaks in realistic urban social networks.

Authors:  Stephen Eubank; Hasan Guclu; V S Anil Kumar; Madhav V Marathe; Aravind Srinivasan; Zoltán Toroczkai; Nan Wang
Journal:  Nature       Date:  2004-05-13       Impact factor: 49.962

Review 3.  Large-scale spatial-transmission models of infectious disease.

Authors:  Steven Riley
Journal:  Science       Date:  2007-06-01       Impact factor: 47.728

4.  Multiscale mobility networks and the spatial spreading of infectious diseases.

Authors:  Duygu Balcan; Vittoria Colizza; Bruno Gonçalves; Hao Hu; José J Ramasco; Alessandro Vespignani
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

5.  Spread of Zika virus in the Americas.

Authors:  Qian Zhang; Kaiyuan Sun; Matteo Chinazzi; Ana Pastore Y Piontti; Natalie E Dean; Diana Patricia Rojas; Stefano Merler; Dina Mistry; Piero Poletti; Luca Rossi; Margaret Bray; M Elizabeth Halloran; Ira M Longini; Alessandro Vespignani
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-25       Impact factor: 11.205

6.  Comparing large-scale computational approaches to epidemic modeling: agent-based versus structured metapopulation models.

Authors:  Marco Ajelli; Bruno Gonçalves; Duygu Balcan; Vittoria Colizza; Hao Hu; José J Ramasco; Stefano Merler; Alessandro Vespignani
Journal:  BMC Infect Dis       Date:  2010-06-29       Impact factor: 3.090

7.  Network Science Based Quantification of Resilience Demonstrated on the Indian Railways Network.

Authors:  Udit Bhatia; Devashish Kumar; Evan Kodra; Auroop R Ganguly
Journal:  PLoS One       Date:  2015-11-04       Impact factor: 3.240

Review 8.  Mathematical models of infectious disease transmission.

Authors:  Nicholas C Grassly; Christophe Fraser
Journal:  Nat Rev Microbiol       Date:  2008-06       Impact factor: 60.633

9.  An interactive web-based dashboard to track COVID-19 in real time.

Authors:  Ensheng Dong; Hongru Du; Lauren Gardner
Journal:  Lancet Infect Dis       Date:  2020-02-19       Impact factor: 25.071

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  1 in total

1.  Computational decision-support tools for urban design to improve resilience against COVID-19 and other infectious diseases: A systematic review.

Authors:  Liu Yang; Michiyo Iwami; Yishan Chen; Mingbo Wu; Koen H van Dam
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  1 in total

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