Literature DB >> 33457446

COVID-19 detection and heatmap generation in chest x-ray images.

Worapan Kusakunniran1, Sarattha Karnjanapreechakorn1, Thanongchai Siriapisith2, Punyanuch Borwarnginn1, Krittanat Sutassananon1, Trongtum Tongdee2, Pairash Saiviroonporn2.   

Abstract

Purpose: The outbreak of COVID-19 or coronavirus was first reported in 2019. It has widely and rapidly spread around the world. The detection of COVID-19 cases is one of the important factors to stop the epidemic, because the infected individuals must be quarantined. One reliable way to detect COVID-19 cases is using chest x-ray images, where signals of the infection are located in lung areas. We propose a solution to automatically classify COVID-19 cases in chest x-ray images. Approach: The ResNet-101 architecture is adopted as the main network with more than 44 millions parameters. The whole net is trained using the large size of 1500 × 1500 x-ray images. The heatmap under the region of interest of segmented lung is constructed to visualize and emphasize signals of COVID-19 in each input x-ray image. Lungs are segmented using the pretrained U-Net. The confidence score of being COVID-19 is also calculated for each classification result.
Results: The proposed solution is evaluated based on COVID-19 and normal cases. It is also tested on unseen classes to validate a regularization of the constructed model. They include other normal cases where chest x-ray images are normal without any disease but with some small remarks, and other abnormal cases where chest x-ray images are abnormal with some other diseases containing remarks similar to COVID-19. The proposed method can achieve the sensitivity, specificity, and accuracy of 97%, 98%, and 98%, respectively. Conclusions: It can be concluded that the proposed solution can detect COVID-19 in a chest x-ray image. The heatmap and confidence score of the detection are also demonstrated, such that users or human experts can use them for a final diagnosis in practical usages.
© 2021 The Authors.

Entities:  

Keywords:  COVID-19; ResNet; chest x-ray; heatmap; lung detection

Year:  2021        PMID: 33457446      PMCID: PMC7804292          DOI: 10.1117/1.JMI.8.S1.014001

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  8 in total

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Authors:  Linda Wang; Zhong Qiu Lin; Alexander Wong
Journal:  Sci Rep       Date:  2020-11-11       Impact factor: 4.379

  8 in total
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  5 in total

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