Literature DB >> 33456976

Modification of Nuclear Compartments and the 3D Genome in the Course of a Viral Infection.

S V Razin1, A A Gavrilov1, O V Iarovaia1.   

Abstract

The review addresses the question of how the structural and functional compartmentalization of the cell nucleus and the 3D organization of the cellular genome are modified during the infection of cells with various viruses. Particular attention is paid to the role of the introduced changes in the implementation of the viral strategy to evade the antiviral defense systems and provide conditions for viral replication. The discussion focuses on viruses replicating in the cell nucleus. Cytoplasmic viruses are mentioned in cases when a significant reorganization of the nuclear compartments or the 3D genome structure occurs during an infection with these viruses. Copyright ® 2020 National Research University Higher School of Economics.

Entities:  

Keywords:  nuclear compartmentalization; spatial organization of the eukaryotic genome; virus infection

Year:  2020        PMID: 33456976      PMCID: PMC7800604          DOI: 10.32607/actanaturae.11041

Source DB:  PubMed          Journal:  Acta Naturae        ISSN: 2075-8251            Impact factor:   1.845


  188 in total

Review 1.  Functional roles of HIV-1 Tat protein in the nucleus.

Authors:  Yana R Musinova; Eugene V Sheval; Carla Dib; Diego Germini; Yegor S Vassetzky
Journal:  Cell Mol Life Sci       Date:  2015-10-27       Impact factor: 9.261

2.  In vivo evidence that transcription and splicing are coordinated by a recruiting mechanism.

Authors:  L F Jiménez-García; D L Spector
Journal:  Cell       Date:  1993-04-09       Impact factor: 41.582

3.  Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells.

Authors:  Stefan Schoenfelder; Tom Sexton; Lyubomira Chakalova; Nathan F Cope; Alice Horton; Simon Andrews; Sreenivasulu Kurukuti; Jennifer A Mitchell; David Umlauf; Daniela S Dimitrova; Christopher H Eskiw; Yanquan Luo; Chia-Lin Wei; Yijun Ruan; James J Bieker; Peter Fraser
Journal:  Nat Genet       Date:  2009-12-13       Impact factor: 38.330

4.  Comprehensive mapping of long-range interactions reveals folding principles of the human genome.

Authors:  Erez Lieberman-Aiden; Nynke L van Berkum; Louise Williams; Maxim Imakaev; Tobias Ragoczy; Agnes Telling; Ido Amit; Bryan R Lajoie; Peter J Sabo; Michael O Dorschner; Richard Sandstrom; Bradley Bernstein; M A Bender; Mark Groudine; Andreas Gnirke; John Stamatoyannopoulos; Leonid A Mirny; Eric S Lander; Job Dekker
Journal:  Science       Date:  2009-10-09       Impact factor: 47.728

Review 5.  Transcription-driven genome organization: a model for chromosome structure and the regulation of gene expression tested through simulations.

Authors:  Peter R Cook; Davide Marenduzzo
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

Review 6.  Paraspeckle nuclear bodies--useful uselessness?

Authors:  Shinichi Nakagawa; Tetsuro Hirose
Journal:  Cell Mol Life Sci       Date:  2012-04-04       Impact factor: 9.261

7.  Detecting statistically significant common insertion sites in retroviral insertional mutagenesis screens.

Authors:  Jeroen de Ridder; Anthony Uren; Jaap Kool; Marcel Reinders; Lodewyk Wessels
Journal:  PLoS Comput Biol       Date:  2006-10-24       Impact factor: 4.475

8.  MYC activation and BCL2L11 silencing by a tumour virus through the large-scale reconfiguration of enhancer-promoter hubs.

Authors:  C David Wood; Hildegonda Veenstra; Sarika Khasnis; Andrea Gunnell; Helen M Webb; Claire Shannon-Lowe; Simon Andrews; Cameron S Osborne; Michelle J West
Journal:  Elife       Date:  2016-08-04       Impact factor: 8.140

9.  Non-structural protein 1 of H3N2 influenza A virus induces nucleolar stress via interaction with nucleolin.

Authors:  Yinxia Yan; Yongming Du; Gefei Wang; Kangsheng Li
Journal:  Sci Rep       Date:  2017-12-19       Impact factor: 4.379

10.  Papillomavirus genomes associate with BRD4 to replicate at fragile sites in the host genome.

Authors:  Moon Kyoo Jang; Kui Shen; Alison A McBride
Journal:  PLoS Pathog       Date:  2014-05-15       Impact factor: 6.823

View more
  1 in total

1.  Evaluation of chromatin mesoscale organization.

Authors:  Dana Lorber; Talila Volk
Journal:  APL Bioeng       Date:  2022-01-12
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.