Literature DB >> 33452501

Recombinant extracellular vesicles as biological reference material for method development, data normalization and assessment of (pre-)analytical variables.

Edward Geeurickx1,2, Lien Lippens1,2,3, Pekka Rappu4, Bruno G De Geest2,5, Olivier De Wever1,2, An Hendrix6,7.   

Abstract

The diagnostic and therapeutic use of extracellular vesicles (EV) is under intense investigation and may lead to societal benefits. Reference materials are an invaluable resource for developing, improving and assessing the performance of regulated EV applications and for quantitative and objective data interpretation. We have engineered recombinant EV (rEV) as a biological reference material. rEV have similar biochemical and biophysical characteristics to sample EV and function as an internal quantitative and qualitative control throughout analysis. Spiking rEV in bodily fluids prior to EV analysis maps technical variability of EV applications and promotes intra- and inter-laboratory studies. This protocol, which is an Extension to our previously published protocol (Tulkens et al., 2020), describes the production, separation and quality assurance of rEV, their dilution and addition to bodily fluids, and the detection steps based on complementary fluorescence, nucleic acid and protein measurements. We demonstrate the use of rEV for method development, data normalization and assessment of pre-analytical variables. The protocol can be adopted by researchers with standard laboratory and basic EV separation/characterization experience and requires ~4-5 d.

Mesh:

Year:  2021        PMID: 33452501     DOI: 10.1038/s41596-020-00446-5

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  44 in total

1.  EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research.

Authors:  Jan Van Deun; Pieter Mestdagh; Patrizia Agostinis; Özden Akay; Sushma Anand; Jasper Anckaert; Zoraida Andreu Martinez; Tine Baetens; Els Beghein; Laurence Bertier; Geert Berx; Janneke Boere; Stephanie Boukouris; Michel Bremer; Dominik Buschmann; James B Byrd; Clara Casert; Lesley Cheng; Anna Cmoch; Delphine Daveloose; Eva De Smedt; Seyma Demirsoy; Victoria Depoorter; Bert Dhondt; Tom A P Driedonks; Aleksandra Dudek; Abdou Elsharawy; Ilaria Floris; Andrew D Foers; Kathrin Gärtner; Abhishek D Garg; Edward Geeurickx; Jan Gettemans; Farzaneh Ghazavi; Bernd Giebel; Tom Groot Kormelink; Grace Hancock; Hetty Helsmoortel; Andrew F Hill; Vincent Hyenne; Hina Kalra; David Kim; Joanna Kowal; Sandra Kraemer; Petra Leidinger; Carina Leonelli; Yaxuan Liang; Lien Lippens; Shu Liu; Alessandra Lo Cicero; Shaun Martin; Suresh Mathivanan; Prabhu Mathiyalagan; Támas Matusek; Gloria Milani; Marta Monguió-Tortajada; Liselot M Mus; Dillon C Muth; Andrea Németh; Esther N M Nolte-'t Hoen; Lorraine O'Driscoll; Roberta Palmulli; Michael W Pfaffl; Bjarke Primdal-Bengtson; Erminia Romano; Quentin Rousseau; Susmita Sahoo; Natalia Sampaio; Monisha Samuel; Benjamin Scicluna; Bieke Soen; Anneleen Steels; Johannes V Swinnen; Maarit Takatalo; Safia Thaminy; Clotilde Théry; Joeri Tulkens; Isabel Van Audenhove; Susanne van der Grein; Alan Van Goethem; Martijn J van Herwijnen; Guillaume Van Niel; Nadine Van Roy; Alexander R Van Vliet; Niels Vandamme; Suzanne Vanhauwaert; Glenn Vergauwen; Frederik Verweij; Annelynn Wallaert; Marca Wauben; Kenneth W Witwer; Marijke I Zonneveld; Olivier De Wever; Jo Vandesompele; An Hendrix
Journal:  Nat Methods       Date:  2017-02-28       Impact factor: 28.547

2.  Sexuality and the developmentally disabled.

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Review 4.  What Are We Looking At? Extracellular Vesicles, Lipoproteins, or Both?

Authors:  Jens B Simonsen
Journal:  Circ Res       Date:  2017-09-29       Impact factor: 17.367

Review 5.  Shedding light on the cell biology of extracellular vesicles.

Authors:  Guillaume van Niel; Gisela D'Angelo; Graça Raposo
Journal:  Nat Rev Mol Cell Biol       Date:  2018-01-17       Impact factor: 94.444

Review 6.  Extracellular Vesicles and Neurodegenerative Diseases.

Authors:  Andrew F Hill
Journal:  J Neurosci       Date:  2019-11-20       Impact factor: 6.167

7.  Atheroprotective communication between endothelial cells and smooth muscle cells through miRNAs.

Authors:  Eduard Hergenreider; Susanne Heydt; Karine Tréguer; Thomas Boettger; Anton J G Horrevoets; Andreas M Zeiher; Margot P Scheffer; Achilleas S Frangakis; Xiaoke Yin; Manuel Mayr; Thomas Braun; Carmen Urbich; Reinier A Boon; Stefanie Dimmeler
Journal:  Nat Cell Biol       Date:  2012-02-12       Impact factor: 28.824

8.  Glypican-1 identifies cancer exosomes and detects early pancreatic cancer.

Authors:  Sonia A Melo; Linda B Luecke; Christoph Kahlert; Agustin F Fernandez; Seth T Gammon; Judith Kaye; Valerie S LeBleu; Elizabeth A Mittendorf; Juergen Weitz; Nuh Rahbari; Christoph Reissfelder; Christian Pilarsky; Mario F Fraga; David Piwnica-Worms; Raghu Kalluri
Journal:  Nature       Date:  2015-06-24       Impact factor: 69.504

9.  Mesenchymal stem cells-derived exosomes are more immunosuppressive than microparticles in inflammatory arthritis.

Authors:  Stella Cosenza; Karine Toupet; Marie Maumus; Patricia Luz-Crawford; Olivier Blanc-Brude; Christian Jorgensen; Danièle Noël
Journal:  Theranostics       Date:  2018-02-03       Impact factor: 11.556

10.  Exosomes facilitate therapeutic targeting of oncogenic KRAS in pancreatic cancer.

Authors:  Sushrut Kamerkar; Valerie S LeBleu; Hikaru Sugimoto; Sujuan Yang; Carolina F Ruivo; Sonia A Melo; J Jack Lee; Raghu Kalluri
Journal:  Nature       Date:  2017-06-07       Impact factor: 49.962

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  4 in total

Review 1.  Utilising extracellular vesicles for early cancer diagnostics: benefits, challenges and recommendations for the future.

Authors:  Ryan Charles Pink; Ellie-May Beaman; Priya Samuel; Susan Ann Brooks; David Raul Francisco Carter
Journal:  Br J Cancer       Date:  2022-01-10       Impact factor: 7.640

2.  Robust sequential biophysical fractionation of blood plasma to study variations in the biomolecular landscape of systemically circulating extracellular vesicles across clinical conditions.

Authors:  Glenn Vergauwen; Joeri Tulkens; Cláudio Pinheiro; Francisco Avila Cobos; Sándor Dedeyne; Marie-Angélique De Scheerder; Linos Vandekerckhove; Francis Impens; Ilkka Miinalainen; Geert Braems; Kris Gevaert; Pieter Mestdagh; Jo Vandesompele; Hannelore Denys; Olivier De Wever; An Hendrix
Journal:  J Extracell Vesicles       Date:  2021-08-14

Review 3.  Separation, characterization, and standardization of extracellular vesicles for drug delivery applications.

Authors:  Dominik Buschmann; Veronika Mussack; James Brian Byrd
Journal:  Adv Drug Deliv Rev       Date:  2021-05-05       Impact factor: 17.873

4.  Stability of Erythrocyte-Derived Nanovesicles Assessed by Light Scattering and Electron Microscopy.

Authors:  Darja Božič; Matej Hočevar; Matic Kisovec; Manca Pajnič; Ljubiša Pađen; Marko Jeran; Apolonija Bedina Zavec; Marjetka Podobnik; Ksenija Kogej; Aleš Iglič; Veronika Kralj-Iglič
Journal:  Int J Mol Sci       Date:  2021-11-25       Impact factor: 5.923

  4 in total

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