Literature DB >> 33452456

Small non-coding RNAs in human cancer: function, clinical utility, and characterization.

Zhao Zhang1, Jian Zhang2, Lixia Diao3, Leng Han4.   

Abstract

Small non-coding RNAs (sncRNAs) play critical roles in multiple regulatory processes, including transcription, post-transcription, and translation. Emerging evidence reveals the critical roles of sncRNAs in cancer development and their potential role as biomarkers and/or therapeutic targets. In this paper, we review recent research on four sncRNA species with functional significance in cancer: small nucleolar RNAs, transfer RNA, small nuclear RNAs, and piwi-interacting RNAs. We introduce their functional roles in tumorigenesis and discuss the potential utility of sncRNAs as prognostic and diagnostic biomarkers and therapeutic targets. We further summarize approaches to characterize sncRNAs in a high-throughput manner, including the specific library construction and computational framework. Our review provides a perspective of the functions, clinical utility, and characterization of sncRNAs in cancer.

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Year:  2021        PMID: 33452456     DOI: 10.1038/s41388-020-01630-3

Source DB:  PubMed          Journal:  Oncogene        ISSN: 0950-9232            Impact factor:   9.867


  60 in total

Review 1.  Non-coding RNAs in hepatocellular carcinoma: molecular functions and pathological implications.

Authors:  Chun-Ming Wong; Felice Ho-Ching Tsang; Irene Oi-Lin Ng
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2018-01-10       Impact factor: 46.802

Review 2.  Role of microRNA in anticancer drug resistance.

Authors:  Tongsen Zheng; Jiabei Wang; Xi Chen; Lianxin Liu
Journal:  Int J Cancer       Date:  2010-01-01       Impact factor: 7.396

Review 3.  Small non-coding RNA and cancer.

Authors:  Giulia Romano; Dario Veneziano; Mario Acunzo; Carlo M Croce
Journal:  Carcinogenesis       Date:  2017-05-01       Impact factor: 4.944

4.  Mining diverse small RNA species in the deep transcriptome.

Authors:  Kasey C Vickers; Leslie A Roteta; Holli Hucheson-Dilks; Leng Han; Yan Guo
Journal:  Trends Biochem Sci       Date:  2014-11-27       Impact factor: 13.807

5.  An updated human snoRNAome.

Authors:  Hadi Jorjani; Stephanie Kehr; Dominik J Jedlinski; Rafal Gumienny; Jana Hertel; Peter F Stadler; Mihaela Zavolan; Andreas R Gruber
Journal:  Nucleic Acids Res       Date:  2016-05-12       Impact factor: 16.971

6.  The Cancer Genome Atlas Pan-Cancer analysis project.

Authors:  John N Weinstein; Eric A Collisson; Gordon B Mills; Kenna R Mills Shaw; Brad A Ozenberger; Kyle Ellrott; Ilya Shmulevich; Chris Sander; Joshua M Stuart
Journal:  Nat Genet       Date:  2013-10       Impact factor: 38.330

Review 7.  The next thing in prognostic molecular markers: microRNA signatures of cancer.

Authors:  William M Grady; Muneesh Tewari
Journal:  Gut       Date:  2010-06       Impact factor: 23.059

8.  Next-generation characterization of the Cancer Cell Line Encyclopedia.

Authors:  Mahmoud Ghandi; Franklin W Huang; Judit Jané-Valbuena; Gregory V Kryukov; Christopher C Lo; E Robert McDonald; Jordi Barretina; Ellen T Gelfand; Craig M Bielski; Haoxin Li; Kevin Hu; Alexander Y Andreev-Drakhlin; Jaegil Kim; Julian M Hess; Brian J Haas; François Aguet; Barbara A Weir; Michael V Rothberg; Brenton R Paolella; Michael S Lawrence; Rehan Akbani; Yiling Lu; Hong L Tiv; Prafulla C Gokhale; Antoine de Weck; Ali Amin Mansour; Coyin Oh; Juliann Shih; Kevin Hadi; Yanay Rosen; Jonathan Bistline; Kavitha Venkatesan; Anupama Reddy; Dmitriy Sonkin; Manway Liu; Joseph Lehar; Joshua M Korn; Dale A Porter; Michael D Jones; Javad Golji; Giordano Caponigro; Jordan E Taylor; Caitlin M Dunning; Amanda L Creech; Allison C Warren; James M McFarland; Mahdi Zamanighomi; Audrey Kauffmann; Nicolas Stransky; Marcin Imielinski; Yosef E Maruvka; Andrew D Cherniack; Aviad Tsherniak; Francisca Vazquez; Jacob D Jaffe; Andrew A Lane; David M Weinstock; Cory M Johannessen; Michael P Morrissey; Frank Stegmeier; Robert Schlegel; William C Hahn; Gad Getz; Gordon B Mills; Jesse S Boehm; Todd R Golub; Levi A Garraway; William R Sellers
Journal:  Nature       Date:  2019-05-08       Impact factor: 49.962

9.  MicroRNAs: tools for cancer diagnostics.

Authors:  T Paranjape; F J Slack; J B Weidhaas
Journal:  Gut       Date:  2009-11       Impact factor: 23.059

10.  MicroRNA dynamics in the stages of tumorigenesis correlate with hallmark capabilities of cancer.

Authors:  Peter Olson; Jun Lu; Hao Zhang; Anny Shai; Matthew G Chun; Yucheng Wang; Steven K Libutti; Eric K Nakakura; Todd R Golub; Douglas Hanahan
Journal:  Genes Dev       Date:  2009-09-15       Impact factor: 11.361

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  7 in total

1.  Identification of Small Nucleolar RNA SNORD60 as a Potential Biomarker and Its Clinical Significance in Lung Adenocarcinoma.

Authors:  Hongwei Zhou; Yibing Yao; Yan Li; Nannan Guo; Huanhuan Zhang; Zhikuan Wang; Yingtai Chen; Guanghai Dai
Journal:  Biomed Res Int       Date:  2022-06-07       Impact factor: 3.246

Review 2.  Secreted Non-Coding RNAs: Functional Impact on the Tumor Microenvironment and Clinical Relevance in Triple-Negative Breast Cancer.

Authors:  Silvia Di Agostino; Mahrou Vahabi; Chiara Turco; Giulia Fontemaggi
Journal:  Noncoding RNA       Date:  2022-01-11

Review 3.  Non-Coding RNAs and Oral Cancer: Small Molecules With Big Functions.

Authors:  Leila Erfanparast; Mohammad Taghizadieh; Ali Akbar Shekarchi
Journal:  Front Oncol       Date:  2022-07-11       Impact factor: 5.738

4.  A Comprehensive Characterization of Small RNA Profiles by Massively Parallel Sequencing in Six Forensic Body Fluids/Tissue.

Authors:  Zhiyong Liu; Qiangwei Wang; Nana Wang; Yu Zang; Riga Wu; Hongyu Sun
Journal:  Genes (Basel)       Date:  2022-08-25       Impact factor: 4.141

Review 5.  A Quality by Design Approach in Pharmaceutical Development of Non-Viral Vectors with a Focus on miRNA.

Authors:  Ioana Toma; Alina Silvia Porfire; Lucia Ruxandra Tefas; Ioana Berindan-Neagoe; Ioan Tomuță
Journal:  Pharmaceutics       Date:  2022-07-16       Impact factor: 6.525

Review 6.  Using ncRNAs as Tools in Cancer Diagnosis and Treatment-The Way towards Personalized Medicine to Improve Patients' Health.

Authors:  Roberto Piergentili; Giuseppe Basile; Cristina Nocella; Roberto Carnevale; Enrico Marinelli; Renato Patrone; Simona Zaami
Journal:  Int J Mol Sci       Date:  2022-08-19       Impact factor: 6.208

Review 7.  Epigenetic remodelling in human hepatocellular carcinoma.

Authors:  Maria Rita Braghini; Oriana Lo Re; Ilaria Romito; Maite G Fernandez-Barrena; Barbara Barbaro; Silvia Pomella; Rossella Rota; Manlio Vinciguerra; Matias A Avila; Anna Alisi
Journal:  J Exp Clin Cancer Res       Date:  2022-03-24
  7 in total

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