Literature DB >> 33452236

Weighted gene coexpression network and experimental analyses identify lncRNA SPRR2C as a regulator of the IL-22-stimulated HaCaT cell phenotype through the miR-330/STAT1/S100A7 axis.

Meijunzi Luo1, Pan Huang1, Yi Pan1, Zhu Zhu2, Rong Zhou1, Zhibo Yang1, Chang Wang3.   

Abstract

Psoriasis is a chronic inflammatory disease of the skin with highly complex pathogenesis. In this study, we identified lncRNA SPRR2C (small proline-rich protein 2C) as a hub gene with a critical effect on the pathogenesis of psoriasis and response to treatment using both weighted gene coexpression network analysis (WGCNA) and differential expression analysis. SPRR2C expression was significantly upregulated in both psoriatic lesion samples and HaCaT cell lines in response to IL-22 treatment. After SPRR2C knockdown, IL-22-induced suppression of HaCaT proliferation, changes in the KRT5/14/1/10 protein levels, and suppression of the IL-1β, IL-6, and TNF-α mRNA levels were dramatically reversed. In the coexpression network with SPRR2C based on GSE114286, miR-330 was significantly negatively correlated with SPRR2C, while STAT1 and S100A7 were positively correlated with SPRR2C. By binding to miR-330, SPRR2C competed with STAT1 and S100A7 to counteract miR-330-mediated suppression of STAT1 and S100A7. MiR-330 overexpression also reversed the IL-22-induced changes in HaCaT cell lines; in response to IL-22 treatment, miR-330 inhibition significantly attenuated the effects of SPRR2C knockdown. STAT1 and S100A7 expression was significantly upregulated in psoriatic lesion samples. The expression of miR-330 had a negative correlation with the expression of SPRR2C, while the expression of SPRR2C had a positive correlation with the expression of STAT1 and S100A7. Thus, SPRR2C modulates the IL-22-stimulated HaCaT cell phenotype through the miR-330/STAT1/S100A7 axis. WGCNA might uncover additional biological pathways that are crucial in the pathogenesis and response to the treatment of psoriasis.

Entities:  

Year:  2021        PMID: 33452236      PMCID: PMC7810847          DOI: 10.1038/s41419-020-03305-z

Source DB:  PubMed          Journal:  Cell Death Dis            Impact factor:   8.469


  61 in total

1.  miR-330-5p inhibits proliferation and migration of keratinocytes by targeting Pdia3 expression.

Authors:  Bong-Kyu Kim; Hye-In Yoo; Keonwoo Choi; Sungjoo Kim Yoon
Journal:  FEBS J       Date:  2015-10-18       Impact factor: 5.542

2.  IL-17A upregulates keratin 17 expression in keratinocytes through STAT1- and STAT3-dependent mechanisms.

Authors:  Xiaowei Shi; Liang Jin; Erle Dang; Ting Chang; Zhenzhen Feng; Yufeng Liu; Gang Wang
Journal:  J Invest Dermatol       Date:  2011-07-28       Impact factor: 8.551

3.  STAT1 in peripheral tissue differentially regulates homing of antigen-specific Th1 and Th2 cells.

Authors:  Zamaneh Mikhak; Carolyn M Fleming; Benjamin D Medoff; Seddon Y Thomas; Andrew M Tager; Gabriele S Campanella; Andrew D Luster
Journal:  J Immunol       Date:  2006-04-15       Impact factor: 5.422

4.  Weighted gene co-expression based biomarker discovery for psoriasis detection.

Authors:  Sudharsana Sundarrajan; Mohanapriya Arumugam
Journal:  Gene       Date:  2016-08-11       Impact factor: 3.688

5.  Intraindividual genome expression analysis reveals a specific molecular signature of psoriasis and eczema.

Authors:  Maria Quaranta; Bettina Knapp; Natalie Garzorz; Martina Mattii; Venu Pullabhatla; Davide Pennino; Christian Andres; Claudia Traidl-Hoffmann; Andrea Cavani; Fabian J Theis; Johannes Ring; Carsten B Schmidt-Weber; Stefanie Eyerich; Kilian Eyerich
Journal:  Sci Transl Med       Date:  2014-07-09       Impact factor: 17.956

6.  Locus 1q21 Gene expression changes in atopic dermatitis skin lesions: deregulation of small proline-rich region 1A.

Authors:  Jerzy Jarzab; Barbara Filipowska; Jadwiga Zebracka; Małgorzata Kowalska; Andrzej Bozek; Regina Rachowska; Elzbieta Gubala; Alicja Grzanka; Ewa Hadas; Barbara Jarzab
Journal:  Int Arch Allergy Immunol       Date:  2009-08-06       Impact factor: 2.749

7.  MicroRNA-326 regulates profibrotic functions of transforming growth factor-β in pulmonary fibrosis.

Authors:  Sudipta Das; Manish Kumar; Vinny Negi; Bijay Pattnaik; Y S Prakash; Anurag Agrawal; Balaram Ghosh
Journal:  Am J Respir Cell Mol Biol       Date:  2014-05       Impact factor: 6.914

8.  Genome-wide transcriptional analysis of T cell activation reveals differential gene expression associated with psoriasis.

Authors:  Nuria Palau; Antonio Julià; Carlos Ferrándiz; Lluís Puig; Eduardo Fonseca; Emilia Fernández; María López-Lasanta; Raül Tortosa; Sara Marsal
Journal:  BMC Genomics       Date:  2013-11-23       Impact factor: 3.969

9.  Chemokine CXCL1 mediated neutrophil recruitment: Role of glycosaminoglycan interactions.

Authors:  Kirti V Sawant; Krishna Mohan Poluri; Amit K Dutta; Krishna Mohan Sepuru; Anna Troshkina; Roberto P Garofalo; Krishna Rajarathnam
Journal:  Sci Rep       Date:  2016-09-14       Impact factor: 4.379

10.  MicroRNA-519a promotes tumor growth by targeting PTEN/PI3K/AKT signaling in hepatocellular carcinoma.

Authors:  Kangsheng Tu; Zhikui Liu; Bowen Yao; Shaoshan Han; Wei Yang
Journal:  Int J Oncol       Date:  2015-12-28       Impact factor: 5.650

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  6 in total

Review 1.  LncRNA NCK1-AS1-mediated regulatory functions in human diseases.

Authors:  Yingfan Wang; Jie Pan; Zongzong Sun
Journal:  Clin Transl Oncol       Date:  2022-09-21       Impact factor: 3.340

2.  Leucosceptoside A from Devil's Claw Modulates Psoriasis-like Inflammation via Suppression of the PI3K/AKT Signaling Pathway in Keratinocytes.

Authors:  Ivanka K Koycheva; Liliya V Mihaylova; Monika N Todorova; Zhivka P Balcheva-Sivenova; Kalina Alipieva; Claudio Ferrante; Giustino Orlando; Milen I Georgiev
Journal:  Molecules       Date:  2021-11-20       Impact factor: 4.411

Review 3.  Maximizing the Utility of Transcriptomics Data in Inflammatory Skin Diseases.

Authors:  Jingni Wu; Zhixiao Fang; Teng Liu; Wei Hu; Yangjun Wu; Shengli Li
Journal:  Front Immunol       Date:  2021-10-29       Impact factor: 7.561

4.  A Pancancer Analysis of the Oncogenic Role of S100 Calcium Binding Protein A7 (S100A7) in Human Tumors.

Authors:  Ge Peng; Saya Tsukamoto; Ko Okumura; Hideoki Ogawa; Shigaku Ikeda; François Niyonsaba
Journal:  Biology (Basel)       Date:  2022-02-11

Review 5.  Skin-Expressing lncRNAs in Inflammatory Responses.

Authors:  Alanna Shefler; Matthew T Patrick; Rachael Wasikowski; Jiahan Chen; Mrinal K Sarkar; Johann E Gudjonsson; Lam C Tsoi
Journal:  Front Genet       Date:  2022-04-26       Impact factor: 4.772

Review 6.  The Role of T Helper 22 Cells in Dermatological Disorders.

Authors:  Yu Pan; Dan Du; Lian Wang; Xiaoyun Wang; Gu He; Xian Jiang
Journal:  Front Immunol       Date:  2022-07-14       Impact factor: 8.786

  6 in total

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