Literature DB >> 33450720

Phosphorylation-dependent regulation of messenger RNA transcription, processing and translation within biomolecular condensates.

Michael L Nosella1, Julie D Forman-Kay2.   

Abstract

Regulation of messenger RNA (mRNA) transcription, processing and translation occurs in the context of biomolecular condensates. How the physical properties of condensates connect with their biological regulatory functions is an ongoing area of interest, particularly for RNA metabolic pathways. Phosphorylation has emerged as an important mechanism for regulating protein phase separation propensities and localization patterns into different condensates, affecting compositions and dynamics. Key factors in transcription, mRNA processing and translation exhibit such phosphorylation-dependent changes in their roles within condensates, including their catalytic activities. Phosphorylation is increasingly understood to regulate the exchange of proteins through functionally linked condensates to fulfil their mRNA metabolic functions.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Keywords:  Biomolecular condensates; FUS; GW bodies; Histone locus bodies; Mediator; Nuclear speckles; P-bodies; Phase separation; Phosphorylation; Prion-like domains; RNA polymerase II; RNA-binding proteins; Stress granules; Superenhancer clusters; Transcription; Transcription factories; Translation; mRNA processing

Year:  2021        PMID: 33450720     DOI: 10.1016/j.ceb.2020.12.007

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  9 in total

1.  Interaction hot spots for phase separation revealed by NMR studies of a CAPRIN1 condensed phase.

Authors:  Tae Hun Kim; Brandon J Payliss; Michael L Nosella; Ian T W Lee; Yuki Toyama; Julie D Forman-Kay; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

2.  Probing Liquid-Liquid Phase Separation of RNA-Binding Proteins In Vitro and In Vivo.

Authors:  Stephanie Heinrich; Maria Hondele
Journal:  Methods Mol Biol       Date:  2022

3.  Human coronaviruses disassemble processing bodies.

Authors:  Mariel Kleer; Rory P Mulloy; Carolyn-Ann Robinson; Danyel Evseev; Maxwell P Bui-Marinos; Elizabeth L Castle; Arinjay Banerjee; Samira Mubareka; Karen Mossman; Jennifer A Corcoran
Journal:  PLoS Pathog       Date:  2022-08-23       Impact factor: 7.464

Review 4.  m6A in the Signal Transduction Network.

Authors:  Ki-Hong Jang; Chloe R Heras; Gina Lee
Journal:  Mol Cells       Date:  2022-06-24       Impact factor: 4.250

5.  Identification of embryonic RNA granules that act as sites of mRNA translation after changing their physical properties.

Authors:  Keisuke Sato; Moeko Sakai; Anna Ishii; Kaori Maehata; Yuki Takada; Kyota Yasuda; Tomoya Kotani
Journal:  iScience       Date:  2022-05-05

Review 6.  Transcription Regulators and Membraneless Organelles Challenges to Investigate Them.

Authors:  Katarzyna Sołtys; Andrzej Ożyhar
Journal:  Int J Mol Sci       Date:  2021-11-25       Impact factor: 5.923

7.  CTCF-mediated chromatin looping provides a topological framework for the formation of phase-separated transcriptional condensates.

Authors:  Ryanggeun Lee; Moo-Koo Kang; Yong-Jin Kim; Bobae Yang; Hwanyong Shim; Sugyung Kim; Kyungwoo Kim; Chul Min Yang; Byeong-Gyu Min; Woong-Jae Jung; Eun-Chong Lee; Jung-Sik Joo; Gunhee Park; Won-Ki Cho; Hyoung-Pyo Kim
Journal:  Nucleic Acids Res       Date:  2022-01-11       Impact factor: 16.971

8.  Coevolution of the Ess1-CTD axis in polar fungi suggests a role for phase separation in cold tolerance.

Authors:  Ryan J Palumbo; Nathan McKean; Erinn Leatherman; Kevin E W Namitz; Laurie Connell; Aaron Wolfe; Kelsey Moody; Cene Gostinčar; Nina Gunde-Cimerman; Alaji Bah; Steven D Hanes
Journal:  Sci Adv       Date:  2022-09-07       Impact factor: 14.957

9.  Solubility Parameters of Amino Acids on Liquid-Liquid Phase Separation and Aggregation of Proteins.

Authors:  Akira Nomoto; Suguru Nishinami; Kentaro Shiraki
Journal:  Front Cell Dev Biol       Date:  2021-06-16
  9 in total

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