Literature DB >> 33444390

Source identification of infectious diseases in networks via label ranking.

Jianye Zhou1, Yuewen Jiang2, Biqing Huang1.   

Abstract

BACKGROUND: Outbreaks of infectious diseases would cause great losses to the human society. Source identification in networks has drawn considerable interest in order to understand and control the infectious disease propagation processes. Unsatisfactory accuracy and high time complexity are major obstacles to practical applications under various real-world situations for existing source identification algorithms.
METHODS: This study attempts to measure the possibility for nodes to become the infection source through label ranking. A unified Label Ranking framework for source identification with complete observation and snapshot is proposed. Firstly, a basic label ranking algorithm with complete observation of the network considering both infected and uninfected nodes is designed. Our inferred infection source node with the highest label ranking tends to have more infected nodes surrounding it, which makes it likely to be in the center of infection subgraph and far from the uninfected frontier. A two-stage algorithm for source identification via semi-supervised learning and label ranking is further proposed to address the source identification issue with snapshot.
RESULTS: Extensive experiments are conducted on both synthetic and real-world network datasets. It turns out that the proposed label ranking algorithms are capable of identifying the propagation source under different situations fairly accurately with acceptable computational complexity without knowing the underlying model of infection propagation.
CONCLUSIONS: The effectiveness and efficiency of the label ranking algorithms proposed in this study make them be of practical value for infection source identification.

Entities:  

Year:  2021        PMID: 33444390      PMCID: PMC7808631          DOI: 10.1371/journal.pone.0245344

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  10 in total

Review 1.  Community structure in social and biological networks.

Authors:  M Girvan; M E J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-11-15

3.  Near linear time algorithm to detect community structures in large-scale networks.

Authors:  Usha Nandini Raghavan; Réka Albert; Soundar Kumara
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4.  Locating the source of diffusion in large-scale networks.

Authors:  Pedro C Pinto; Patrick Thiran; Martin Vetterli
Journal:  Phys Rev Lett       Date:  2012-08-10       Impact factor: 9.161

5.  Inferring the origin of an epidemic with a dynamic message-passing algorithm.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-07-01

6.  Bayesian inference of epidemics on networks via belief propagation.

Authors:  Fabrizio Altarelli; Alfredo Braunstein; Luca Dall'Asta; Alejandro Lage-Castellanos; Riccardo Zecchina
Journal:  Phys Rev Lett       Date:  2014-03-17       Impact factor: 9.161

7.  Some discrete-time SI, SIR, and SIS epidemic models.

Authors:  L J Allen
Journal:  Math Biosci       Date:  1994-11       Impact factor: 2.144

8.  Identification of Patient Zero in Static and Temporal Networks: Robustness and Limitations.

Authors:  Nino Antulov-Fantulin; Alen Lančić; Tomislav Šmuc; Hrvoje Štefančić; Mile Šikić
Journal:  Phys Rev Lett       Date:  2015-06-16       Impact factor: 9.161

9.  Spread of epidemic disease on networks.

Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-07-26

10.  High-resolution measurements of face-to-face contact patterns in a primary school.

Authors:  Juliette Stehlé; Nicolas Voirin; Alain Barrat; Ciro Cattuto; Lorenzo Isella; Jean-François Pinton; Marco Quaggiotto; Wouter Van den Broeck; Corinne Régis; Bruno Lina; Philippe Vanhems
Journal:  PLoS One       Date:  2011-08-16       Impact factor: 3.240

  10 in total
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1.  An adaptive decision-making system supported on user preference predictions for human-robot interactive communication.

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Journal:  User Model User-adapt Interact       Date:  2022-04-09       Impact factor: 4.412

  1 in total

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