Literature DB >> 33441834

Transcript levels of keratin 1/5/6/14/15/16/17 as potential prognostic indicators in melanoma patients.

Wei Han1,2, Chan Hu3, Zhao-Jun Fan1,2, Guo-Liang Shen4,5.   

Abstract

Keratins (KRTs), the intermediate filament-forming proteins of epithelial cells, are extensively used as diagnostic biomarkers in cancers and associated with tumorigenesis and metastasis in multiple cancers. However, the diverse expression patterns and prognostic values of KRTs in melanoma have yet to be elucidated. In the current study, we examined the transcriptional and clinical data of KRTs in patients with melanoma from GEO, TCGA, ONCOMINE, GEPIA, cBioPortal, TIMER and TISIDB databases. We found that the mRNA levels of KRT1/2/5/6/8/10/14/15/16/17 were significantly differential expressed between primary melanoma and metastatic melanoma. The expression levels of KRT1/2/5/6/10/14/15/16/17 were correlated with advanced tumor stage. Survival analysis revealed that the high transcription levels of KRT1/5/6/14/15/16/17 were associated with low overall survival in melanoma patients. GSEA analysis indicated that the most involved hallmarks pathways were P53 pathway, KRAS signaling, estrogen response early and estrogen response late. Furthermore, we found some correlations among the expression of KRTs and the infiltration of immune cells. Our study may provide novel insights for the selection of prognostic biomarkers for melanoma.

Entities:  

Year:  2021        PMID: 33441834      PMCID: PMC7806772          DOI: 10.1038/s41598-020-80336-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  64 in total

1.  S159P mutation of keratin 10 gene causes severe form of epidermolytic hyperkeratosis.

Authors:  P-J Chen; C-X Li; J Wen; Y-S Peng; K Zeng; S-Q Zhang; X Tian; X-B Zhang
Journal:  J Eur Acad Dermatol Venereol       Date:  2015-09-15       Impact factor: 6.166

2.  An unexpected role for keratin 10 end domains in susceptibility to skin cancer.

Authors:  Jiangli Chen; Xing Cheng; Maria Merched-Sauvage; Carlos Caulin; Dennis R Roop; Peter J Koch
Journal:  J Cell Sci       Date:  2006-11-21       Impact factor: 5.285

3.  Breast Cancer Targeting Peptide Binds Keratin 1: A New Molecular Marker for Targeted Drug Delivery to Breast Cancer.

Authors:  Rania Soudy; Hashem Etayash; Kamran Bahadorani; Afsaneh Lavasanifar; Kamaljit Kaur
Journal:  Mol Pharm       Date:  2017-02-16       Impact factor: 4.939

Review 4.  A structural scaffolding of intermediate filaments in health and disease.

Authors:  E Fuchs; D W Cleveland
Journal:  Science       Date:  1998-01-23       Impact factor: 47.728

5.  Keratin 15, transcobalamin I and homeobox gene Hox-B13 expression in breast phyllodes tumors: novel markers in biological classification.

Authors:  Luke Yong-Zheng Chong; Poh Yian Cheok; Wai-Jin Tan; Aye Aye Thike; George Allen; Mei Kim Ang; Aik Seng Ooi; Patrick Tan; Bin Tean Teh; Puay Hoon Tan
Journal:  Breast Cancer Res Treat       Date:  2011-05-15       Impact factor: 4.872

6.  Keratin 15 expression in stratified epithelia: downregulation in activated keratinocytes.

Authors:  A Waseem; B Dogan; N Tidman; Y Alam; P Purkis; S Jackson; A Lalli; M Machesney; I M Leigh
Journal:  J Invest Dermatol       Date:  1999-03       Impact factor: 8.551

7.  The expression of KRT2 and its effect on melanogenesis in alpaca skins.

Authors:  Yucong Cui; Yajun Song; Qingling Geng; Zengfeng Ding; Yilong Qin; Ruiwen Fan; Changsheng Dong; Jianjun Geng
Journal:  Acta Histochem       Date:  2016-06-02       Impact factor: 2.479

8.  Cross-species application of cDNA microarrays to profile gene expression using UV-induced melanoma in Monodelphis domestica as the model system.

Authors:  Zhiqiang Wang; Thomas P Dooley; Ernest V Curto; Richard L Davis; John L VandeBerg
Journal:  Genomics       Date:  2004-04       Impact factor: 5.736

9.  Identification of a gene signature for discriminating metastatic from primary melanoma using a molecular interaction network approach.

Authors:  Rahul Metri; Abhilash Mohan; Jérémie Nsengimana; Joanna Pozniak; Carmen Molina-Paris; Julia Newton-Bishop; David Bishop; Nagasuma Chandra
Journal:  Sci Rep       Date:  2017-12-11       Impact factor: 4.379

10.  The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists.

Authors:  Da Wei Huang; Brad T Sherman; Qina Tan; Jack R Collins; W Gregory Alvord; Jean Roayaei; Robert Stephens; Michael W Baseler; H Clifford Lane; Richard A Lempicki
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  15 in total

1.  Quantitative Proteomic Analysis of Cervical Cancer Tissues Identifies Proteins Associated With Cancer Progression.

Authors:  Alberto Ramírez-Torres; Jeovanis Gil; Sandra Contreras; Graciela Ramírez; Heriberto A Valencia-González; Emmanuel Salazar-Bustamante; Leopoldo Gómez-Caudillo; Alejandro García-Carranca; Sergio Encarnación-Guevara
Journal:  Cancer Genomics Proteomics       Date:  2022 Mar-Apr       Impact factor: 4.069

2.  Bioinformatic analysis identifies epidermal development genes that contribute to melanoma progression.

Authors:  Gastón Barbero; María Victoria Castro; María Josefina Quezada; Pablo Lopez-Bergami
Journal:  Med Oncol       Date:  2022-07-14       Impact factor: 3.738

3.  Gut Microbiota Dysbiosis Induced by Decreasing Endogenous Melatonin Mediates the Pathogenesis of Alzheimer's Disease and Obesity.

Authors:  Boqi Zhang; Tong Chen; Maosheng Cao; Chenfeng Yuan; Russel J Reiter; Zijiao Zhao; Yun Zhao; Lu Chen; Wenjing Fan; Xin Wang; Xu Zhou; Chunjin Li
Journal:  Front Immunol       Date:  2022-05-10       Impact factor: 8.786

4.  Immune-related lncRNA pairs as novel signature to predict prognosis and immune landscape in melanoma patients.

Authors:  Zhehong Li; Junqiang Wei; Honghong Zheng; Xintian Gan; Mingze Song; Yafang Zhang; Yu Jin
Journal:  Medicine (Baltimore)       Date:  2022-01-07       Impact factor: 1.889

5.  Bothrops Jararaca Snake Venom Modulates Key Cancer-Related Proteins in Breast Tumor Cell Lines.

Authors:  Carolina Yukiko Kisaki; Stephanie Santos Suehiro Arcos; Fabio Montoni; Wellington da Silva Santos; Hamida Macêdo Calacina; Ismael Feitosa Lima; Daniela Cajado-Carvalho; Emer Suavinho Ferro; Milton Yutaka Nishiyama-Jr; Leo Kei Iwai
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6.  A Comprehensive Bioinformatic Analysis of NOTCH Pathway Involvement in Stomach Adenocarcinoma.

Authors:  Dongyun Xue; Dong Li; Cong Dou; Junshan Li
Journal:  Dis Markers       Date:  2021-12-08       Impact factor: 3.434

7.  Prognostic significance of AP-2α/γ targets as cancer therapeutics.

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Journal:  Sci Rep       Date:  2022-03-31       Impact factor: 4.379

8.  Developmental and sexual dimorphic atlas of the prenatal mouse external genitalia at the single-cell level.

Authors:  Ciro Maurizio Amato; Humphrey Hung-Chang Yao
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-21       Impact factor: 11.205

Review 9.  Aspects of the Epigenetic Regulation of EMT Related to Cancer Metastasis.

Authors:  Ewa Nowak; Ilona Bednarek
Journal:  Cells       Date:  2021-12-06       Impact factor: 6.600

10.  Whole-Genome Profiles of Malay Colorectal Cancer Patients with Intact MMR Proteins.

Authors:  Wan Khairunnisa Wan Juhari; Khairul Bariah Ahmad Amin Noordin; Andee Dzulkarnaen Zakaria; Wan Faiziah Wan Abdul Rahman; Wan Muhamad Mokhzani Wan Muhamad Mokhter; Muhammad Radzi Abu Hassan; Ahmad Shanwani Mohammed Sidek; Bin Alwi Zilfalil
Journal:  Genes (Basel)       Date:  2021-09-20       Impact factor: 4.096

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