Literature DB >> 33439299

Hemocyanins of Muricidae: New 'Insights' Unravel an Additional Highly Hydrophilic 800 kDa Mass Within the Molecule.

Gabriela Giannina Schäfer1, Lukas Jörg Grebe2, Frank Depoix2, Bernhard Lieb2.   

Abstract

Hemocyanins are giant oxygen transport proteins that freely float within the hemolymph of most molluscs. The basic quaternary structure of molluscan hemocyanins is a cylindrical decamer with a diameter of 35 nm which is built of 400 kDa subunits. Previously published results, however, showed that one out of two hemocyanin subunits of Rapana venosa encompasses two polypeptides, one 300 kDa and one 100 kDa polypeptide which aggregate to typical 4 MDa and 8 MDa hemocyanin (di-)decamer molecules. It was shown that the polypeptides are bound most probably by one or more cysteine disulfide bridges but it remained open if these polypeptides were coded by one or two genes. Our here presented results clearly showed that both polypeptides are coded by one gene only and that this phenomenon can also be found in the gastropod Nucella lapillus. Thus, it can be defined as clade-specific for Muricidae, a group of the very diverse Caenogastropoda. In addition, we discovered a further deviation of this hemocyanin subunit within both species, namely a region of 340 mainly hydrophilic amino acids (especially histidines and aspartic acids) which have not been identified in any other molluscan hemocyanin, yet. Our results indicate that, within the quaternary structure, these additional amino acids most probably protrude within the inner part of didecamer cylinders, forming a large extra mass of up to 800 kDa. They presumably influence the structure of the protein and may affect the functionality. Thus, these findings reveal further insights into the evolution and structures of gastropod hemocyanins.

Entities:  

Keywords:  Disulfide bridge; Gastropoda; Hemocyanins; Histidines; Muricidae; Protein evolution

Year:  2021        PMID: 33439299      PMCID: PMC7884596          DOI: 10.1007/s00239-020-09986-6

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  36 in total

1.  Evidence for a cysteine-histidine thioether bridge in functional units of molluscan haemocyanins and location of the disulfide bridges in functional units d and g of the betaC-haemocyanin of Helix pomatia.

Authors:  C Gielens; N De Geest; X Q Xin; B Devreese; J Van Beeumen; G Préaux
Journal:  Eur J Biochem       Date:  1997-09-15

2.  Conformational states of the Rapana thomasiana hemocyanin and its substructures studied by dynamic light scattering and time-resolved fluorescence spectroscopy.

Authors:  Dessislava Georgieva; Daniel Schwark; Peter Nikolov; Krassimira Idakieva; Katja Parvanova; Karsten Dierks; Nicolay Genov; Christian Betzel
Journal:  Biophys J       Date:  2004-11-08       Impact factor: 4.033

3.  Negative staining of thinly spread biological samples.

Authors:  J Robin Harris
Journal:  Methods Mol Biol       Date:  2007

4.  Keyhole limpet hemocyanin: 9-A CryoEM structure and molecular model of the KLH1 didecamer reveal the interfaces and intricate topology of the 160 functional units.

Authors:  Christos Gatsogiannis; Jürgen Markl
Journal:  J Mol Biol       Date:  2008-11-05       Impact factor: 5.469

5.  Amino acid contribution to protein solubility: Asp, Glu, and Ser contribute more favorably than the other hydrophilic amino acids in RNase Sa.

Authors:  Saul R Trevino; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2006-10-13       Impact factor: 5.469

6.  Structure, assembly and dynamics of macromolecular complexes by single particle cryo-electron microscopy.

Authors:  Alexandre Durand; Gabor Papai; Patrick Schultz
Journal:  J Nanobiotechnology       Date:  2013-12-10       Impact factor: 10.435

7.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

8.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

9.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

10.  cisTEM, user-friendly software for single-particle image processing.

Authors:  Timothy Grant; Alexis Rohou; Nikolaus Grigorieff
Journal:  Elife       Date:  2018-03-07       Impact factor: 8.140

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  1 in total

1.  The Evolution of Hemocyanin Genes in Caenogastropoda: Gene Duplications and Intron Accumulation in Highly Diverse Gastropods.

Authors:  Gabriela Giannina Schäfer; Lukas Jörg Grebe; Robin Schinkel; Bernhard Lieb
Journal:  J Mol Evol       Date:  2021-11-10       Impact factor: 2.395

  1 in total

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