Literature DB >> 33437436

DNA metabarcoding provides insights into seasonal diet variations in Chinese mole shrew (Anourosorex squamipes) with potential implications for evaluating crop impacts.

Ke-Yi Tang1, Fei Xie1, Hong-Yi Liu2, Ying-Ting Pu1, Dan Chen1, Bo-Xin Qin1, Chang-Kun Fu1, Qiong Wang1, Shun-de Chen1, Ke-Ji Guo3.   

Abstract

Diet analysis of potential small mammals pest species is important for understanding feeding ecology and evaluating their impact on crops and stored foods. Chinese mole shrew (Anourosorex squamipes), distributed in Southwest China, has previously been reported as a farmland pest. Effective population management of this species requires a better understanding of its diet, which can be difficult to determine with high taxonomic resolution using conventional microhistological methods. In this study, we used two DNA metabarcoding assays to identify 38 animal species and 65 plant genera from shrew stomach contents, which suggest that A. squamipes is an omnivorous generalist. Earthworms are the most prevalent (>90%) and abundant (>80%) food items in the diverse diet of A. squamipes. Species of the Fabaceae (frequency of occurrence [FO]: 88%; such as peanuts) and Poaceae (FO: 71%; such as rice) families were the most common plant foods identified in the diet of A. squamipes. Additionally, we found a seasonal decrease in the diversity and abundance of invertebrate foods from spring and summer to winter. Chinese mole shrew has a diverse and flexible diet throughout the year to adapt to seasonal variations in food availability, contributing to its survival even when food resources are limited. This study provides a higher resolution identification of the diet of A. squamipes than has been previously described and is valuable for understanding shrew feeding ecology as well as evaluating possible species impacts on crops.
© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Entities:  

Keywords:  Chinese mole shrew; ecology of pest; metabarcoding; molecular diet analysis; seasonal diet changes

Year:  2020        PMID: 33437436      PMCID: PMC7790647          DOI: 10.1002/ece3.7055

Source DB:  PubMed          Journal:  Ecol Evol        ISSN: 2045-7758            Impact factor:   2.912


  25 in total

1.  An inordinate fondness for beetles? Variation in seasonal dietary preferences of night-roosting big brown bats (Eptesicus fuscus).

Authors:  Elizabeth L Clare; William O C Symondson; Melville Brockett Fenton
Journal:  Mol Ecol       Date:  2014-08       Impact factor: 6.185

2.  Interglacial refugia preserved high genetic diversity of the Chinese mole shrew in the mountains of southwest China.

Authors:  K He; N-Q Hu; X Chen; J-T Li; X-L Jiang
Journal:  Heredity (Edinb)       Date:  2015-08-19       Impact factor: 3.821

3.  Stable isotope analysis of diet confirms niche separation of two sympatric species of Namib Desert lizard.

Authors:  Ian W Murray; Hilary M Lease; Robyn S Hetem; Duncan Mitchell; Andrea Fuller; Stephan Woodborne
Journal:  Integr Zool       Date:  2016-01       Impact factor: 2.654

4.  Newfound hantavirus in Chinese mole shrew, Vietnam.

Authors:  Jin-Won Song; Hae Ji Kang; Ki-Joon Song; Thang T Truong; Shannon N Bennett; Satoru Arai; Ninh U Truong; Richard Yanagihara
Journal:  Emerg Infect Dis       Date:  2007-11       Impact factor: 6.883

5.  DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea).

Authors:  Tina E Berry; Sylvia K Osterrieder; Dáithí C Murray; Megan L Coghlan; Anthony J Richardson; Alicia K Grealy; Michael Stat; Lars Bejder; Michael Bunce
Journal:  Ecol Evol       Date:  2017-06-12       Impact factor: 2.912

6.  Skin and gut microbiomes of a wild mammal respond to different environmental cues.

Authors:  Anton Lavrinienko; Eugene Tukalenko; Tapio Mappes; Phillip C Watts
Journal:  Microbiome       Date:  2018-11-26       Impact factor: 14.650

7.  Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure.

Authors:  Kristine Bohmann; Shyam Gopalakrishnan; Martin Nielsen; Luisa Dos Santos Bay Nielsen; Gareth Jones; Daniel G Streicker; M Thomas P Gilbert
Journal:  Mol Ecol Resour       Date:  2018-04-19       Impact factor: 7.090

8.  Species-level biodiversity assessment using marine environmental DNA metabarcoding requires protocol optimization and standardization.

Authors:  Gert-Jan Jeunen; Michael Knapp; Hamish G Spencer; Helen R Taylor; Miles D Lamare; Michael Stat; Michael Bunce; Neil J Gemmell
Journal:  Ecol Evol       Date:  2019-01-15       Impact factor: 2.912

9.  Metagenomics Reveals Seasonal Functional Adaptation of the Gut Microbiome to Host Feeding and Fasting in the Chinese Alligator.

Authors:  Ke-Yi Tang; Zhen-Wei Wang; Qiu-Hong Wan; Sheng-Guo Fang
Journal:  Front Microbiol       Date:  2019-10-25       Impact factor: 5.640

10.  Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter.

Authors:  Paul R Hope; Kristine Bohmann; M Thomas P Gilbert; Marie Lisandra Zepeda-Mendoza; Orly Razgour; Gareth Jones
Journal:  Front Zool       Date:  2014-05-09       Impact factor: 3.172

View more
  4 in total

1.  DNA metabarcoding reveals a broad dietary range for Tasmanian devils introduced to a naive ecosystem.

Authors:  Elspeth A McLennan; Phil Wise; Andrew V Lee; Catherine E Grueber; Katherine Belov; Carolyn J Hogg
Journal:  Ecol Evol       Date:  2022-05-19       Impact factor: 3.167

2.  Comparative metagenomics analysis reveals how the diet shapes the gut microbiota in several small mammals.

Authors:  Fengjun Li; Shengzhi Yang; Linwan Zhang; Lu Qiao; Lei Wang; Song He; Jian Li; Nan Yang; Bisong Yue; Chuang Zhou
Journal:  Ecol Evol       Date:  2022-01-15       Impact factor: 2.912

3.  Infestation of chigger mites on Chinese mole shrew, Anourosorex squamipes, in Southwest China and ecological analysis.

Authors:  Bei Li; Xian-Guo Guo; Cheng-Fu Zhao; Zhi-Wei Zhang; Rong Fan; Pei-Ying Peng; Wen-Yu Song; Tian-Guang Ren; Lei Zhang; Ti-Jun Qian
Journal:  Parasite       Date:  2022-07-28       Impact factor: 3.020

4.  Seasonal and ontological variation in diet and age-related differences in prey choice, by an insectivorous songbird.

Authors:  Sarah R Davies; Ian P Vaughan; Robert J Thomas; Lorna E Drake; Angela Marchbank; William O C Symondson
Journal:  Ecol Evol       Date:  2022-08-11       Impact factor: 3.167

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.