Literature DB >> 33436942

Clinically relevant variants in a large cohort of Indian patients with Marfan syndrome and related disorders identified by next-generation sequencing.

Shalini S Nayak1, Pauline E Schneeberger2, Siddaramappa J Patil3, Karegowda M Arun3, Pujar V Suresh3, Viralam S Kiran3, Sateesh Siddaiah3, Shreesha Maiya3, Shrikanth K Venkatachalagupta3, Neethukrishna Kausthubham1, Fanny Kortüm2, Isabella Rau2, Alexandra Wey-Fabrizius2, Lotte Van Den Heuvel4, Josephina Meester4, Lut Van Laer4, Anju Shukla1, Bart Loeys4, Katta M Girisha5, Kerstin Kutsche6.   

Abstract

Marfan syndrome and related disorders are a group of heritable connective tissue disorders and share many clinical features that involve cardiovascular, skeletal, craniofacial, ocular, and cutaneous abnormalities. The majority of affected individuals have aortopathies associated with early mortality and morbidity. Implementation of targeted gene panel next-generation sequencing in these individuals is a powerful tool to obtain a genetic diagnosis. Here, we report on clinical and genetic spectrum of 53 families from India with a total of 83 patients who had a clinical diagnosis suggestive of Marfan syndrome or related disorders. We obtained a molecular diagnosis in 45/53 (85%) index patients, in which 36/53 (68%) had rare variants in FBN1 (Marfan syndrome; 63 patients in total), seven (13.3%) in TGFBR1/TGFBR2 (Loeys-Dietz syndrome; nine patients in total) and two patients (3.7%) in SKI (Shprintzen-Goldberg syndrome). 21 of 41 rare variants (51.2%) were novel. We did not detect a disease-associated variant in 8 (15%) index patients, and none of them met the Ghent Marfan diagnostic criteria. We found the homozygous FBN1 variant p.(Arg954His) in a boy with typical features of Marfan syndrome. Our study is the first reporting on the spectrum of variants in FBN1, TGFBR1, TGFBR2, and SKI in Indian individuals.

Entities:  

Year:  2021        PMID: 33436942      PMCID: PMC7804850          DOI: 10.1038/s41598-020-80755-7

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  65 in total

Review 1.  TGF-β signalopathies as a paradigm for translational medicine.

Authors:  Elyssa Cannaerts; Gerarda van de Beek; Aline Verstraeten; Lut Van Laer; Bart Loeys
Journal:  Eur J Med Genet       Date:  2015-10-24       Impact factor: 2.708

2.  M-CAP eliminates a majority of variants of uncertain significance in clinical exomes at high sensitivity.

Authors:  Karthik A Jagadeesh; Aaron M Wenger; Mark J Berger; Harendra Guturu; Peter D Stenson; David N Cooper; Jonathan A Bernstein; Gill Bejerano
Journal:  Nat Genet       Date:  2016-10-24       Impact factor: 38.330

3.  The FBN1 (R2726W) mutation is not fully penetrant.

Authors:  S Buoni; R Zannolli; F Macucci; S Ansaldi; M Grasso; E Arbustini; A Fois
Journal:  Ann Hum Genet       Date:  2004-11       Impact factor: 1.670

4.  Routine Genetic Testing for Thoracic Aortic Aneurysm and Dissection in a Clinical Setting.

Authors:  Bulat A Ziganshin; Allison E Bailey; Celinez Coons; Daniel Dykas; Paris Charilaou; Lokman H Tanriverdi; Lucy Liu; Maryann Tranquilli; Allen E Bale; John A Elefteriades
Journal:  Ann Thorac Surg       Date:  2015-07-15       Impact factor: 4.330

5.  Applying massive parallel sequencing to molecular diagnosis of Marfan and Loeys-Dietz syndromes.

Authors:  Machteld Baetens; Lut Van Laer; Kim De Leeneer; Jan Hellemans; Joachim De Schrijver; Hendrik Van De Voorde; Marjolijn Renard; Hal Dietz; Ronald V Lacro; Björn Menten; Wim Van Criekinge; Julie De Backer; Anne De Paepe; Bart Loeys; Paul J Coucke
Journal:  Hum Mutat       Date:  2011-07-20       Impact factor: 4.878

6.  Mutation spectrum of the fibrillin-1 (FBN1) gene in Taiwanese patients with Marfan syndrome.

Authors:  Chia-Cheng Hung; Shin-Yu Lin; Chien-Nan Lee; Hui-Yu Cheng; Shuan-Pei Lin; Ming-Ren Chen; Chih-Ping Chen; Chien-Hui Chang; Chiou-Ya Lin; Chih-Chieh Yu; Hsin-Hui Chiu; Wen-Fang Cheng; Hong-Nerng Ho; Dau-Ming Niu; Yi-Ning Su
Journal:  Ann Hum Genet       Date:  2009-11       Impact factor: 1.670

7.  A compound-heterozygous Marfan patient: two defective fibrillin alleles result in a lethal phenotype.

Authors:  L Karttunen; M Raghunath; L Lönnqvist; L Peltonen
Journal:  Am J Hum Genet       Date:  1994-12       Impact factor: 11.025

8.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

9.  Next-generation sequencing of 32 genes associated with hereditary aortopathies and related disorders of connective tissue in a cohort of 199 patients.

Authors:  Sina Renner; Helke Schüler; Malik Alawi; Verena Kolbe; Meike Rybczynski; Rixa Woitschach; Sara Sheikhzadeh; Veronika C Stark; Jakob Olfe; Elke Roser; Friederike Sophia Seggewies; Adrian Mahlmann; Maja Hempel; Melanie J Hartmann; Mathias Hillebrand; Dagmar Wieczorek; Alexander Erich Volk; Katja Kloth; Margarete Koch-Hogrebe; Rami Abou Jamra; Diana Mitter; Janine Altmüller; Alexandra Wey-Fabrizius; Christine Petersen; Isabella Rau; Guntram Borck; Christian Kubisch; Thomas S Mir; Yskert von Kodolitsch; Kerstin Kutsche; Georg Rosenberger
Journal:  Genet Med       Date:  2019-01-24       Impact factor: 8.822

10.  Human Splicing Finder: an online bioinformatics tool to predict splicing signals.

Authors:  François-Olivier Desmet; Dalil Hamroun; Marine Lalande; Gwenaëlle Collod-Béroud; Mireille Claustres; Christophe Béroud
Journal:  Nucleic Acids Res       Date:  2009-04-01       Impact factor: 16.971

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  1 in total

1.  Clinical profile and outcome of ocular manifestation in Marfans syndrome in India.

Authors:  Shreya Shah; Mehul Shah; Pradeep Chandane; Sakshi Makhloga; Deeksha Thorat; Meera Sanghani
Journal:  Indian J Ophthalmol       Date:  2022-02       Impact factor: 2.969

  1 in total

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