Literature DB >> 33436574

Estimating internationally imported cases during the early COVID-19 pandemic.

Tigist F Menkir1, Taylor Chin1, James A Hay1, Erik D Surface1, Pablo M De Salazar1, Caroline O Buckee1, Alexander Watts2, Kamran Khan2,3,4, Ryan Sherbo2, Ada W C Yan5, Michael J Mina1, Marc Lipsitch1, Rene Niehus6.   

Abstract

Early in the COVID-19 pandemic, predictions of international outbreaks were largely based on imported cases from Wuhan, China, potentially missing imports from other cities. We provide a method, combining daily COVID-19 prevalence and flight passenger volume, to estimate importations from 18 Chinese cities to 43 international destinations, including 26 in Africa. Global case importations from China in early January came primarily from Wuhan, but the inferred source shifted to other cities in mid-February, especially for importations to African destinations. We estimate that 10.4 (6.2 - 27.1) COVID-19 cases were imported to these African destinations, which exhibited marked variation in their magnitude and main sources of importation. We estimate that 90% of imported cases arrived between 17 January and 7 February, prior to the first case detections. Our results highlight the dynamic role of source locations, which can help focus surveillance and response efforts.

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Year:  2021        PMID: 33436574      PMCID: PMC7804934          DOI: 10.1038/s41467-020-20219-8

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  19 in total

1.  Bayesian inference of epidemics on networks via belief propagation.

Authors:  Fabrizio Altarelli; Alfredo Braunstein; Luca Dall'Asta; Alejandro Lage-Castellanos; Riccardo Zecchina
Journal:  Phys Rev Lett       Date:  2014-03-17       Impact factor: 9.161

2.  A pneumonia outbreak associated with a new coronavirus of probable bat origin.

Authors:  Peng Zhou; Xing-Lou Yang; Xian-Guang Wang; Ben Hu; Lei Zhang; Wei Zhang; Hao-Rui Si; Yan Zhu; Bei Li; Chao-Lin Huang; Hui-Dong Chen; Jing Chen; Yun Luo; Hua Guo; Ren-Di Jiang; Mei-Qin Liu; Ying Chen; Xu-Rui Shen; Xi Wang; Xiao-Shuang Zheng; Kai Zhao; Quan-Jiao Chen; Fei Deng; Lin-Lin Liu; Bing Yan; Fa-Xian Zhan; Yan-Yi Wang; Geng-Fu Xiao; Zheng-Li Shi
Journal:  Nature       Date:  2020-02-03       Impact factor: 69.504

3.  Estimates of the severity of coronavirus disease 2019: a model-based analysis.

Authors:  Robert Verity; Lucy C Okell; Ilaria Dorigatti; Peter Winskill; Charles Whittaker; Natsuko Imai; Gina Cuomo-Dannenburg; Hayley Thompson; Patrick G T Walker; Han Fu; Amy Dighe; Jamie T Griffin; Marc Baguelin; Sangeeta Bhatia; Adhiratha Boonyasiri; Anne Cori; Zulma Cucunubá; Rich FitzJohn; Katy Gaythorpe; Will Green; Arran Hamlet; Wes Hinsley; Daniel Laydon; Gemma Nedjati-Gilani; Steven Riley; Sabine van Elsland; Erik Volz; Haowei Wang; Yuanrong Wang; Xiaoyue Xi; Christl A Donnelly; Azra C Ghani; Neil M Ferguson
Journal:  Lancet Infect Dis       Date:  2020-03-30       Impact factor: 25.071

4.  Effect of non-pharmaceutical interventions to contain COVID-19 in China.

Authors:  Shengjie Lai; Nick W Ruktanonchai; Liangcai Zhou; Olivia Prosper; Wei Luo; Jessica R Floyd; Amy Wesolowski; Mauricio Santillana; Chi Zhang; Xiangjun Du; Hongjie Yu; Andrew J Tatem
Journal:  Nature       Date:  2020-05-04       Impact factor: 49.962

5.  The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship.

Authors:  Jon C Emery; Timothy W Russell; Yang Liu; Joel Hellewell; Carl Ab Pearson; Gwenan M Knight; Rosalind M Eggo; Adam J Kucharski; Sebastian Funk; Stefan Flasche; Rein Mgj Houben
Journal:  Elife       Date:  2020-08-24       Impact factor: 8.140

6.  Investigation of three clusters of COVID-19 in Singapore: implications for surveillance and response measures.

Authors:  Rachael Pung; Calvin J Chiew; Barnaby E Young; Sarah Chin; Mark I-C Chen; Hannah E Clapham; Alex R Cook; Sebastian Maurer-Stroh; Matthias P H S Toh; Cuiqin Poh; Mabel Low; Joshua Lum; Valerie T J Koh; Tze M Mak; Lin Cui; Raymond V T P Lin; Derrick Heng; Yee-Sin Leo; David C Lye; Vernon J M Lee
Journal:  Lancet       Date:  2020-03-17       Impact factor: 79.321

7.  Identifying Locations with Possible Undetected Imported Severe Acute Respiratory Syndrome Coronavirus 2 Cases by Using Importation Predictions.

Authors:  Pablo Martinez De Salazar; René Niehus; Aimee Taylor; Caroline O'Flaherty Buckee; Marc Lipsitch
Journal:  Emerg Infect Dis       Date:  2020-06-21       Impact factor: 6.883

8.  An investigation of transmission control measures during the first 50 days of the COVID-19 epidemic in China.

Authors:  Huaiyu Tian; Yonghong Liu; Yidan Li; Chieh-Hsi Wu; Bin Chen; Moritz U G Kraemer; Bingying Li; Jun Cai; Bo Xu; Qiqi Yang; Ben Wang; Peng Yang; Yujun Cui; Yimeng Song; Pai Zheng; Quanyi Wang; Ottar N Bjornstad; Ruifu Yang; Bryan T Grenfell; Oliver G Pybus; Christopher Dye
Journal:  Science       Date:  2020-03-31       Impact factor: 47.728

9.  Risk for Transportation of Coronavirus Disease from Wuhan to Other Cities in China.

Authors:  Zhanwei Du; Lin Wang; Simon Cauchemez; Xiaoke Xu; Xianwen Wang; Benjamin J Cowling; Lauren Ancel Meyers
Journal:  Emerg Infect Dis       Date:  2020-05-17       Impact factor: 6.883

10.  Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China.

Authors:  Rene Niehus; Pablo M De Salazar; Aimee R Taylor; Marc Lipsitch
Journal:  Lancet Infect Dis       Date:  2020-04-01       Impact factor: 25.071

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  6 in total

1.  Monoclonal antibody pairs against SARS-CoV-2 for rapid antigen test development.

Authors:  Nol Salcedo; Ankita Reddy; Adam R Gomez; Irene Bosch; Bobby Brooke Herrera
Journal:  PLoS Negl Trop Dis       Date:  2022-03-31

2.  Understanding the uneven spread of COVID-19 in the context of the global interconnected economy.

Authors:  Dimitrios Tsiotas; Vassilis Tselios
Journal:  Sci Rep       Date:  2022-01-13       Impact factor: 4.379

3.  Context-specific emergence and growth of the SARS-CoV-2 Delta variant.

Authors:  John T McCrone; Verity Hill; Sumali Bajaj; Rosario Evans Pena; Ben C Lambert; Rhys Inward; Samir Bhatt; Erik Volz; Christopher Ruis; Simon Dellicour; Guy Baele; Alexander E Zarebski; Adam Sadilek; Neo Wu; Aaron Schneider; Xiang Ji; Jayna Raghwani; Ben Jackson; Rachel Colquhoun; Áine O'Toole; Thomas P Peacock; Kate Twohig; Simon Thelwall; Gavin Dabrera; Richard Myers; Nuno R Faria; Carmen Huber; Isaac I Bogoch; Kamran Khan; Louis du Plessis; Jeffrey C Barrett; David M Aanensen; Wendy S Barclay; Meera Chand; Thomas Connor; Nicholas J Loman; Marc A Suchard; Oliver G Pybus; Andrew Rambaut; Moritz U G Kraemer
Journal:  Res Sq       Date:  2021-12-20

4.  Context-specific emergence and growth of the SARS-CoV-2 Delta variant.

Authors:  John T McCrone; Verity Hill; Sumali Bajaj; Rosario Evans Pena; Ben C Lambert; Rhys Inward; Samir Bhatt; Erik Volz; Christopher Ruis; Simon Dellicour; Guy Baele; Alexander E Zarebski; Adam Sadilek; Neo Wu; Aaron Schneider; Xiang Ji; Jayna Raghwani; Ben Jackson; Rachel Colquhoun; Áine O'Toole; Thomas P Peacock; Kate Twohig; Simon Thelwall; Gavin Dabrera; Richard Myers; Nuno R Faria; Carmen Huber; Isaac I Bogoch; Kamran Khan; Louis du Plessis; Jeffrey C Barrett; David M Aanensen; Wendy S Barclay; Meera Chand; Thomas Connor; Nicholas J Loman; Marc A Suchard; Oliver G Pybus; Andrew Rambaut; Moritz U G Kraemer
Journal:  medRxiv       Date:  2021-12-21

5.  Incidence and Predictors of Imported Cases of COVID-19 in Burkina Faso.

Authors:  Mikaila Kaboré; Kongnimissom Apoline Sondo; Désiré Lucien Dahourou; Yacouba Cissoko; Issa Konaté; Abdoulaye Zaré; Brice Bicaba; Boukary Ouedraogo; Hermann Barro; Eric Arnaud Diendéré; Isabella Asamoah; Sandrine Nadège Damoue; Baperman Abdel Aziz Siri; Ismael Diallo; Peter Puplampu; Armel G Poda; Yacouba Toloba; Sounkalo Dao; Martial Ouédraogo; Seni Kouanda
Journal:  Front Public Health       Date:  2022-02-17

Review 6.  Pandemic control - do's and don'ts from a control theory perspective.

Authors:  Latchezar Tomov; Dimitrina Miteva; Metodija Sekulovski; Hristiana Batselova; Tsvetelina Velikova
Journal:  World J Methodol       Date:  2022-09-20
  6 in total

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