Literature DB >> 33434780

Biological characteristics and biomarkers of novel SARS-CoV-2 facilitated rapid development and implementation of diagnostic tools and surveillance measures.

Gajanan Sampatrao Ghodake1, Surendra Krushna Shinde1, Avinash Ashok Kadam2, Rijuta Ganesh Saratale2, Ganesh Dattatraya Saratale3, Asad Syed4, Abdallah M Elgorban4, Najat Marraiki4, Dae-Young Kim5.   

Abstract

Existing coronavirus named as a severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has speeded its spread across the globe immediately after emergence in China, Wuhan region, at the end of the year 2019. Different techniques, including genome sequencing, structural feature classification by electron microscopy, and chest imaging using computed tomography, are primarily used to diagnose and screen SARS-CoV-2 suspected individuals. Determination of the viral structure, surface proteins, and genome sequence has provided a design blueprint for the diagnostic investigations of novel SARS-CoV-2 virus and rapidly emerging diagnostic technologies, vaccine trials, and cell-entry-inhibiting drugs. Here, we describe recent understandings on the spike glycoprotein (S protein), receptor-binding domain (RBD), and angiotensin-converting enzyme 2 (ACE2) and their receptor complex. This report also aims to review recently established diagnostic technologies and developments in surveillance measures for SARS-CoV-2 as well as the characteristics and performance of emerging techniques. Smartphone apps for contact tracing can help nations to conduct surveillance measures before a vaccine and effective medicines become available. We also describe promising point-of-care (POC) diagnostic technologies that are under consideration by researchers for advancement beyond the proof-of-concept stage. Developing novel diagnostic techniques needs to be facilitated to establish automatic systems, without any personal involvement or arrangement to curb an existing SARS-CoV-2 epidemic crisis, and could also be appropriate for avoiding the emergence of a future epidemic crisis.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Diagnostic technologies; Mobile-health; Point-of-care; Public surveillance; RT-PCR; SARS-CoV-2

Mesh:

Substances:

Year:  2021        PMID: 33434780      PMCID: PMC7836906          DOI: 10.1016/j.bios.2021.112969

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  281 in total

Review 1.  What Are the Most Powerful Immunogen Design Vaccine Strategies? A Structural Biologist's Perspective.

Authors:  Peter D Kwong
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-11-01       Impact factor: 10.005

2.  Vdelta1 T lymphocytes expressing a Th1 phenotype are the major gammadelta T cell subset infiltrating the liver of HCV-infected persons.

Authors:  C Agrati; G D'Offizi; P Narciso; S Abrignani; G Ippolito; V Colizzi; F Poccia
Journal:  Mol Med       Date:  2001-01       Impact factor: 6.354

3.  Cytomegalovirus infection in transplant recipients resolves when circulating gammadelta T lymphocytes expand, suggesting a protective antiviral role.

Authors:  X Lafarge; P Merville; M C Cazin; F Bergé; L Potaux; J F Moreau; J Déchanet-Merville
Journal:  J Infect Dis       Date:  2001-07-31       Impact factor: 5.226

Review 4.  Isothermal nucleic acid amplification technologies for point-of-care diagnostics: a critical review.

Authors:  Pascal Craw; Wamadeva Balachandran
Journal:  Lab Chip       Date:  2012-05-16       Impact factor: 6.799

5.  A smartphone-based diagnostic platform for rapid detection of Zika, chikungunya, and dengue viruses.

Authors:  Aashish Priye; Sara W Bird; Yooli K Light; Cameron S Ball; Oscar A Negrete; Robert J Meagher
Journal:  Sci Rep       Date:  2017-03-20       Impact factor: 4.379

6.  Real-time diagnosis of reactive oxygen species (ROS) in fresh sputum by electrochemical tracing; correlation between COVID-19 and viral-induced ROS in lung/respiratory epithelium during this pandemic.

Authors:  Zohreh Sadat Miripour; Ramin Sarrami-Forooshani; Hassan Sanati; Jalil Makarem; Morteza Sanei Taheri; Fatemeh Shojaeian; Aida Hasanzadeh Eskafi; Fereshteh Abbasvandi; Naser Namdar; Hadi Ghafari; Parisa Aghaee; Ashkan Zandi; Mahsa Faramarzpour; Meisam Hoseinyazdi; Mahtab Tayebi; Mohammad Abdolahad
Journal:  Biosens Bioelectron       Date:  2020-07-08       Impact factor: 10.618

7.  Negative Nasopharyngeal and Oropharyngeal Swabs Do Not Rule Out COVID-19.

Authors:  Poramed Winichakoon; Romanee Chaiwarith; Chalerm Liwsrisakun; Parichat Salee; Aree Goonna; Atikun Limsukon; Quanhathai Kaewpoowat
Journal:  J Clin Microbiol       Date:  2020-04-23       Impact factor: 5.948

8.  COVID-19 pneumonia: what has CT taught us?

Authors:  Elaine Y P Lee; Ming-Yen Ng; Pek-Lan Khong
Journal:  Lancet Infect Dis       Date:  2020-02-24       Impact factor: 25.071

9.  Convergent antibody responses to SARS-CoV-2 in convalescent individuals.

Authors:  Davide F Robbiani; Christian Gaebler; Frauke Muecksch; Julio C C Lorenzi; Zijun Wang; Alice Cho; Marianna Agudelo; Christopher O Barnes; Anna Gazumyan; Shlomo Finkin; Thomas Hägglöf; Thiago Y Oliveira; Charlotte Viant; Arlene Hurley; Hans-Heinrich Hoffmann; Katrina G Millard; Rhonda G Kost; Melissa Cipolla; Kristie Gordon; Filippo Bianchini; Spencer T Chen; Victor Ramos; Roshni Patel; Juan Dizon; Irina Shimeliovich; Pilar Mendoza; Harald Hartweger; Lilian Nogueira; Maggi Pack; Jill Horowitz; Fabian Schmidt; Yiska Weisblum; Eleftherios Michailidis; Alison W Ashbrook; Eric Waltari; John E Pak; Kathryn E Huey-Tubman; Nicholas Koranda; Pauline R Hoffman; Anthony P West; Charles M Rice; Theodora Hatziioannou; Pamela J Bjorkman; Paul D Bieniasz; Marina Caskey; Michel C Nussenzweig
Journal:  Nature       Date:  2020-06-18       Impact factor: 69.504

10.  Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody.

Authors:  Xiaolong Tian; Cheng Li; Ailing Huang; Shuai Xia; Sicong Lu; Zhengli Shi; Lu Lu; Shibo Jiang; Zhenlin Yang; Yanling Wu; Tianlei Ying
Journal:  Emerg Microbes Infect       Date:  2020-02-17       Impact factor: 7.163

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  10 in total

1.  Development and evaluation of time-resolved fluorescent immunochromatographic assay for quantitative detection of SARS-CoV-2 spike antigen.

Authors:  Buzhou Xu; Hao Tang; Yiming Weng; Valerie Sloane Jones; Shuhong Luo; Chih Yun Cho; Yongping Lin; Jianmin Fang; Xuedong Song; Ruo-Pan Huang
Journal:  J Clin Lab Anal       Date:  2022-06-12       Impact factor: 3.124

2.  Isolation of Antibodies Against the Spike Protein of SARS-CoV from Pig Serum for Competitive Immunoassay.

Authors:  Jaeyong Jung; Ji-Hong Bong; Tae-Hun Kim; Jeong Soo Sung; Changkyu Lee; Min-Jung Kang; Hyun Ok Kim; Hyun-Jin Shin; Jae-Chul Pyun
Journal:  Biochip J       Date:  2021-08-27       Impact factor: 3.494

3.  Sensitive and reproducible detection of SARS-CoV-2 using SERS-based microdroplet sensor.

Authors:  Sohyun Park; Chang Su Jeon; Namhyun Choi; Joung-Il Moon; Kang Min Lee; Sung Hyun Pyun; Taejoon Kang; Jaebum Choo
Journal:  Chem Eng J       Date:  2022-05-20       Impact factor: 16.744

4.  SERS-PCR assays of SARS-CoV-2 target genes using Au nanoparticles-internalized Au nanodimple substrates.

Authors:  Yixuan Wu; Hajun Dang; Sung-Gyu Park; Lingxin Chen; Jaebum Choo
Journal:  Biosens Bioelectron       Date:  2021-10-31       Impact factor: 10.618

5.  Biodegradable Nanohybrid Materials as Candidates for Self-Sanitizing Filters Aimed at Protection from SARS-CoV-2 in Public Areas.

Authors:  Anton M Manakhov; Elizaveta S Permyakova; Natalya A Sitnikova; Alphiya R Tsygankova; Alexander Y Alekseev; Maria V Solomatina; Victor S Baidyshev; Zakhar I Popov; Lucie Blahová; Marek Eliáš; Lenka Zajíčková; Andrey M Kovalskii; Alexander N Sheveyko; Philipp V Kiryukhantsev-Korneev; Dmitry V Shtansky; David Nečas; Anastasiya O Solovieva
Journal:  Molecules       Date:  2022-02-16       Impact factor: 4.411

Review 6.  Conventional and Microfluidic Methods for the Detection of Nucleic Acid of SARS-CoV-2.

Authors:  Weidu Song; Taiyi Zhang; Huichao Lin; Yujing Yang; Gaozhen Zhao; Xiaowen Huang
Journal:  Micromachines (Basel)       Date:  2022-04-17       Impact factor: 3.523

7.  One-pot and rapid detection of SARS-CoV-2 viral particles in environment using SERS aptasensor based on a locking amplifier.

Authors:  Cheng Tian; Lei Zhao; Guoliang Qi; Jin Zhu; Shusheng Zhang
Journal:  Sens Actuators B Chem       Date:  2022-07-29       Impact factor: 9.221

Review 8.  Utilizing Electrochemical-Based Sensing Approaches for the Detection of SARS-CoV-2 in Clinical Samples: A Review.

Authors:  Nor Syafirah Zambry; Godwin Attah Obande; Muhammad Fazli Khalid; Yazmin Bustami; Hairul Hisham Hamzah; Mohd Syafiq Awang; Ismail Aziah; Asrulnizam Abd Manaf
Journal:  Biosensors (Basel)       Date:  2022-06-29

Review 9.  COVID-19 Pandemic: Public Health Risk Assessment and Risk Mitigation Strategies.

Authors:  Dae-Young Kim; Surendra Krushna Shinde; Saifullah Lone; Ramasubba Reddy Palem; Gajanan Sampatrao Ghodake
Journal:  J Pers Med       Date:  2021-11-23

Review 10.  Significance of Immune Status of SARS-CoV-2 Infected Patients in Determining the Efficacy of Therapeutic Interventions.

Authors:  Ganesh Dattatraya Saratale; Han-Seung Shin; Surendra Krushna Shinde; Dae-Young Kim; Rijuta Ganesh Saratale; Avinash Ashok Kadam; Manu Kumar; Ali Hassan Bahkali; Asad Syed; Gajanan Sampatrao Ghodake
Journal:  J Pers Med       Date:  2022-02-25
  10 in total

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