Literature DB >> 33431591

What machine learning can do for developmental biology.

Paul Villoutreix1.   

Abstract

Developmental biology has grown into a data intensive science with the development of high-throughput imaging and multi-omics approaches. Machine learning is a versatile set of techniques that can help make sense of these large datasets with minimal human intervention, through tasks such as image segmentation, super-resolution microscopy and cell clustering. In this Spotlight, I introduce the key concepts, advantages and limitations of machine learning, and discuss how these methods are being applied to problems in developmental biology. Specifically, I focus on how machine learning is improving microscopy and single-cell 'omics' techniques and data analysis. Finally, I provide an outlook for the futures of these fields and suggest ways to foster new interdisciplinary developments.
© 2021. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Artificial intelligence; Big data; Machine learning; Neural networks

Mesh:

Year:  2021        PMID: 33431591     DOI: 10.1242/dev.188474

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  4 in total

1.  New strategy for clinical etiologic diagnosis of acute ischemic stroke and blood biomarker discovery based on machine learning.

Authors:  Jin Zhang; Ting Yuan; Sixi Wei; Zhanhui Feng; Boyan Li; Hai Huang
Journal:  RSC Adv       Date:  2022-05-16       Impact factor: 4.036

2.  Deep learning is widely applicable to phenotyping embryonic development and disease.

Authors:  Thomas Naert; Özgün Çiçek; Paulina Ogar; Max Bürgi; Nikko-Ideen Shaidani; Michael M Kaminski; Yuxiao Xu; Kelli Grand; Marko Vujanovic; Daniel Prata; Friedhelm Hildebrandt; Thomas Brox; Olaf Ronneberger; Fabian F Voigt; Fritjof Helmchen; Johannes Loffing; Marko E Horb; Helen Rankin Willsey; Soeren S Lienkamp
Journal:  Development       Date:  2021-11-05       Impact factor: 6.868

Review 3.  Data science in cell imaging.

Authors:  Meghan K Driscoll; Assaf Zaritsky
Journal:  J Cell Sci       Date:  2021-04-01       Impact factor: 5.285

4.  Developmental Physiology: Grand Challenges.

Authors:  Warren Burggren
Journal:  Front Physiol       Date:  2021-06-10       Impact factor: 4.566

  4 in total

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