Literature DB >> 33426289

The complete chloroplast genome of Stephania tetrandra (Menispermaceae).

Lan Cao1, Zejing Mu1, Shasha Sheng1, Yuanyuan Chen1, Guoyue Zhong1, Xiaolang Du1.   

Abstract

The complete chloroplast genome of Stephania tetrandra was sequenced and assembled for the first time. The chloroplast genome is 159,974 bp in length, containing a large single-copy (LSC) region of 90,539 bp and a small single-copy region (SSC) of 20,735 bp, separated by a pair of inverted repeats (IRs) of 24,350 bp. The genome contains 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNA genes, and four rRNA genes. Among them, 15 genes have one intron each and three genes contain two introns. The overall GC content is 37.8%, while the corresponding values of LSC, SSC, and IR regions are 35.8, 32.4, and 43.7%, respectively. Phylogenetic analysis showed that S. tetrandra is more closely related to the clade of two species within Stephania, providing new insight into the evolution of Menispermaceae.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Complete chloroplast genome; Menispermaceae; Stephania tetrandra

Year:  2020        PMID: 33426289      PMCID: PMC7759292          DOI: 10.1080/23802359.2020.1840935

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  Complete chloroplast genome of Stephania tetrandra (Menispermaceae) from Zhejiang Province: insights into molecular structures, comparative genome analysis, mutational hotspots and phylogenetic relationships.

Authors:  Shujie Dong; Zhiqi Ying; Shuisheng Yu; Qirui Wang; Guanghui Liao; Yuqing Ge; Rubin Cheng
Journal:  BMC Genomics       Date:  2021-12-06       Impact factor: 3.969

  1 in total

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