Literature DB >> 33426287

Characterization of the complete mitochondrial genome of Golden cusk, Sirembo imberbis (Ophidiiformes:Ophidiidae).

Nazia Tabassum1, Yeonghye Kim2, Hyun-Woo Kim3.   

Abstract

The complete mitochondrial genome of Sirembo imberbis was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. Total length of the mitogenome was 16,717 bp, which harbors the conserved 13 protein-coding genes (PCGs), 2 ribosomal RNAs (12S and 16S), 22 tRNAs, and two non-coding region (the control region and the origin of light-strand replication). Among 13 protein-coding genes, unusual start codon (GTG) was exclusively identified in COX1, while the incomplete stop codons (TA- or T-) were detected in COX2, COX3, ND2, ND3, ND4 and CytB. As a result of phylogenetic tree, S. imberbis formed a cluster of the family Ophidiidae together with Bassozetus zenkevitchi and Lamprogrammus niger.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Cusk eel; NGS; Ophidiidae; Sirembo imberbis; mitochondrial genome

Year:  2020        PMID: 33426287      PMCID: PMC7759297          DOI: 10.1080/23802359.2020.1840942

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  The complete mitochondrial genome of the Mexican blind brotula Typhlias pearsei (Ophidiiformes: Dinematichthydae): an endemic and troglomorphic cavefish from the Yucatán Peninsula karst aquifer.

Authors:  Jairo Arroyave; Adán Fernando Mar-Silva; Píndaro Díaz-Jaimes
Journal:  Mitochondrial DNA B Resour       Date:  2022-06-24       Impact factor: 0.610

  1 in total

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