Literature DB >> 33425665

The Effectiveness of Mini Primer STR CODIS in DNA Degradation as the Effect of High-Temperature Exposure.

Ahmad Yudianto1,2,3, Fery Setiawan2.   

Abstract

BACKGROUND: More and more today, forensic identification through deoxyribonucleic acid (DNA) examination has achieved greater recognition in supporting Indonesia's law enforcement. Such examination is to determine the origin of a child, paternity cases, genealogical relation, or identifying unknown crime victims. However, along with the development of this DNA material examination, problems arise. DNA undergoes a degradation, commonly known as degraded DNA, which is one of the serious issues frequently encountered by forensic and DNA experts. Some forensic DNA experts take one of the alternatives to overcome this issue by implementing a mini primer set that is through a method to reduce the size of STR assays on DNA core locus examination.
METHODS: In this study, the writers conduct research using the mini primers of CSF1PO, FGA, and D21S11 of the molar teeth exposed to 500°C temperature for 20 and 30 minutes and 750°C for the same amount of time. RESULT: The findings show the DNA contents of molar teeth significantly (p < 0.05) decreased as the effect of high-temperature exposure. PCR result visualization shows CSF1PO is the only locus detected with mini primer exposed to 750°C temperature for 30 minutes (the highest exposure during this research).
CONCLUSIONS: This finding suggests that this locus is potential in examining identification through DNA analysis, especially on a degraded condition as the effect of high-temperature exposure. Besides, this could accelerate the identification process especially on mass disaster events or criminal cases.
Copyright © 2020 Ahmad Yudianto and Fery Setiawan.

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Year:  2020        PMID: 33425665      PMCID: PMC7775127          DOI: 10.1155/2020/2417693

Source DB:  PubMed          Journal:  Anal Cell Pathol (Amst)        ISSN: 2210-7177            Impact factor:   2.916


  14 in total

1.  An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA.

Authors:  P Gill; J Whitaker; C Flaxman; N Brown; J Buckleton
Journal:  Forensic Sci Int       Date:  2000-07-24       Impact factor: 2.395

Review 2.  Ancient DNA.

Authors:  M Hofreiter; D Serre; H N Poinar; M Kuch; S Pääbo
Journal:  Nat Rev Genet       Date:  2001-05       Impact factor: 53.242

3.  The development of reduced size STR amplicons as tools for analysis of degraded DNA.

Authors:  John M Butler; Yin Shen; Bruce R McCord
Journal:  J Forensic Sci       Date:  2003-09       Impact factor: 1.832

4.  An assessment of whether SNPs will replace STRs in national DNA databases--joint considerations of the DNA working group of the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM).

Authors:  Peter Gill; David J Werrett; Bruce Budowle; Richard Guerrieri
Journal:  Sci Justice       Date:  2004 Jan-Mar       Impact factor: 2.124

5.  Analysis of artificially degraded DNA using STRs and SNPs--results of a collaborative European (EDNAP) exercise.

Authors:  L A Dixon; A E Dobbins; H K Pulker; J M Butler; P M Vallone; M D Coble; W Parson; B Berger; P Grubwieser; H S Mogensen; N Morling; K Nielsen; J J Sanchez; E Petkovski; A Carracedo; P Sanchez-Diz; E Ramos-Luis; M Briōn; J A Irwin; R S Just; O Loreille; T J Parsons; D Syndercombe-Court; H Schmitter; B Stradmann-Bellinghausen; K Bender; P Gill
Journal:  Forensic Sci Int       Date:  2005-12-15       Impact factor: 2.395

6.  Thermal degradation of DNA.

Authors:  Moshe Karni; Dolev Zidon; Pazit Polak; Zeev Zalevsky; Orit Shefi
Journal:  DNA Cell Biol       Date:  2013-04-27       Impact factor: 3.311

7.  Ancient DNA: extraction, characterization, molecular cloning, and enzymatic amplification.

Authors:  S Pääbo
Journal:  Proc Natl Acad Sci U S A       Date:  1989-03       Impact factor: 11.205

8.  Amplification of PCR products in excess of 600 base pairs using DNA extracted from decalcified, paraffin wax embedded bone marrow trephine biopsies.

Authors:  C L Wickham; M Boyce; M V Joyner; P Sarsfield; B S Wilkins; D B Jones; S Ellard
Journal:  Mol Pathol       Date:  2000-02

9.  Dental Evidence in Forensic Identification - An Overview, Methodology and Present Status.

Authors:  Kewal Krishan; Tanuj Kanchan; Arun K Garg
Journal:  Open Dent J       Date:  2015-07-31

10.  Heat Stress-Induced DNA Damage.

Authors:  O L Kantidze; A K Velichko; A V Luzhin; S V Razin
Journal:  Acta Naturae       Date:  2016 Apr-Jun       Impact factor: 1.845

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