Literature DB >> 33421764

The dynamics of chromatin architecture in brain development and function.

Izabela Harabula1, Ana Pombo2.   

Abstract

The brain comprises many different cell types with specialized functions which respond and adapt to the continuously changing environment, through tight spatiotemporal regulation of gene expression. The three-dimentional (3D) organisation of the genome is increasingly recognized as a major feature of gene regulation in brain cells, for the activation, repression and poising of gene expression, and in coupling transcription with RNA processing and transport. Here, we discuss the importance of dynamic chromatin organisation in the developmental patterning of the brain, and its role in fine tuning brain activity and plasticity. A better understanding of how disease-associated mutations interfere with chromatin organisation and long-range gene regulation will help reveal the molecular mechanisms underlying complex neurodevelopmental and neuropsychiatric disorders.
Copyright © 2020 Elsevier Ltd. All rights reserved.

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Year:  2021        PMID: 33421764     DOI: 10.1016/j.gde.2020.12.008

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  7 in total

1.  Cell-type specialization is encoded by specific chromatin topologies.

Authors:  Warren Winick-Ng; Alexander Kukalev; Izabela Harabula; Luna Zea-Redondo; Dominik Szabó; Mandy Meijer; Leonid Serebreni; Yingnan Zhang; Simona Bianco; Andrea M Chiariello; Ibai Irastorza-Azcarate; Christoph J Thieme; Thomas M Sparks; Sílvia Carvalho; Luca Fiorillo; Francesco Musella; Ehsan Irani; Elena Torlai Triglia; Aleksandra A Kolodziejczyk; Andreas Abentung; Galina Apostolova; Eleanor J Paul; Vedran Franke; Rieke Kempfer; Altuna Akalin; Sarah A Teichmann; Georg Dechant; Mark A Ungless; Mario Nicodemi; Lonnie Welch; Gonçalo Castelo-Branco; Ana Pombo
Journal:  Nature       Date:  2021-11-17       Impact factor: 49.962

2.  Sex-specific multi-level 3D genome dynamics in the mouse brain.

Authors:  Devin Rocks; Mamta Shukla; Laila Ouldibbat; Silvia C Finnemann; Achyuth Kalluchi; M Jordan Rowley; Marija Kundakovic
Journal:  Nat Commun       Date:  2022-06-15       Impact factor: 17.694

Review 3.  Understanding Regulatory Mechanisms of Brain Function and Disease through 3D Genome Organization.

Authors:  Weifang Liu; Wujuan Zhong; Jiawen Chen; Bo Huang; Ming Hu; Yun Li
Journal:  Genes (Basel)       Date:  2022-03-25       Impact factor: 4.141

Review 4.  Retrotransposons as Drivers of Mammalian Brain Evolution.

Authors:  Roberto Ferrari; Nicole Grandi; Enzo Tramontano; Giorgio Dieci
Journal:  Life (Basel)       Date:  2021-04-22

5.  Evaluation of chromatin mesoscale organization.

Authors:  Dana Lorber; Talila Volk
Journal:  APL Bioeng       Date:  2022-01-12

6.  How can same-gene mutations promote both cancer and developmental disorders?

Authors:  Ruth Nussinov; Chung-Jung Tsai; Hyunbum Jang
Journal:  Sci Adv       Date:  2022-01-14       Impact factor: 14.136

7.  Comparative chromatin accessibility upon BDNF stimulation delineates neuronal regulatory elements.

Authors:  Ignacio L Ibarra; Vikram S Ratnu; Lucia Gordillo; In-Young Hwang; Luca Mariani; Kathryn Weinand; Henrik M Hammarén; Jennifer Heck; Martha L Bulyk; Mikhail M Savitski; Judith B Zaugg; Kyung-Min Noh
Journal:  Mol Syst Biol       Date:  2022-08       Impact factor: 13.068

  7 in total

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