Literature DB >> 33420907

Model systems for studying polyphosphate biology: a focus on microorganisms.

Alix Denoncourt1,2, Michael Downey3,4.   

Abstract

Polyphosphates (polyP) are polymers of inorganic phosphates joined by high-energy bonds to form long chains. These chains are present in all forms of life but were once disregarded as 'molecular fossils'. PolyP has gained attention in recent years following new links to diverse biological roles ranging from energy storage to cell signaling. PolyP research in humans and other higher eukaryotes is limited by a lack of suitable tools and awaits the identification of enzymatic players that would enable more comprehensive studies. Therefore, many of the most important insights have come from single-cell model systems. Here, we review determinants of polyP metabolism, regulation, and function in major microbial systems, including bacteria, fungi, protozoa, and algae. We highlight key similarities and differences that may aid in our understanding of how polyP impacts cell physiology at a molecular level.

Entities:  

Keywords:  Acidocalcisomes; Ddp1; Model systems; PPK; PPX; Polyphosphate; Ppn1; Ppn2; Ppx1; VTC; Vacuole; Vtc4; polyP

Year:  2021        PMID: 33420907     DOI: 10.1007/s00294-020-01148-x

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  158 in total

1.  Origin of exopolyphosphatase processivity: Fusion of an ASKHA phosphotransferase and a cyclic nucleotide phosphodiesterase homolog.

Authors:  Johnjeff Alvarado; Anita Ghosh; Tyler Janovitz; Andrew Jauregui; Miriam S Hasson; David Avram Sanders
Journal:  Structure       Date:  2006-08       Impact factor: 5.006

2.  A novel family of predicted phosphoesterases includes Drosophila prune protein and bacterial RecJ exonuclease.

Authors:  L Aravind; E V Koonin
Journal:  Trends Biochem Sci       Date:  1998-01       Impact factor: 13.807

3.  Plc1p, Arg82p, and Kcs1p, enzymes involved in inositol pyrophosphate synthesis, are essential for phosphate regulation and polyphosphate accumulation in Saccharomyces cerevisiae.

Authors:  Choowong Auesukaree; Hidehito Tochio; Masahiro Shirakawa; Yoshinobu Kaneko; Satoshi Harashima
Journal:  J Biol Chem       Date:  2005-05-02       Impact factor: 5.157

4.  Screening a Protein Array with Synthetic Biotinylated Inorganic Polyphosphate To Define the Human PolyP-ome.

Authors:  Cristina Azevedo; Jyoti Singh; Nicole Steck; Alexandre Hofer; Felix A Ruiz; Tanya Singh; Henning J Jessen; Adolfo Saiardi
Journal:  ACS Chem Biol       Date:  2018-07-08       Impact factor: 5.100

Review 5.  Role of inorganic polyphosphate in mammalian cells: from signal transduction and mitochondrial metabolism to cell death.

Authors:  Plamena R Angelova; Artyom Y Baev; Alexey V Berezhnov; Andrey Y Abramov
Journal:  Biochem Soc Trans       Date:  2016-02       Impact factor: 5.407

6.  Novel assay reveals multiple pathways regulating stress-induced accumulations of inorganic polyphosphate in Escherichia coli.

Authors:  D Ault-Riché; C D Fraley; C M Tzeng; A Kornberg
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

7.  Intracellular phosphate serves as a signal for the regulation of the PHO pathway in Saccharomyces cerevisiae.

Authors:  Choowong Auesukaree; Tomoyuki Homma; Hidehito Tochio; Masahiro Shirakawa; Yoshinobu Kaneko; Satoshi Harashima
Journal:  J Biol Chem       Date:  2004-02-13       Impact factor: 5.157

8.  Critical function of a Chlamydomonas reinhardtii putative polyphosphate polymerase subunit during nutrient deprivation.

Authors:  Munevver Aksoy; Wirulda Pootakham; Arthur R Grossman
Journal:  Plant Cell       Date:  2014-10-03       Impact factor: 11.277

9.  Protein polyphosphorylation of lysine residues by inorganic polyphosphate.

Authors:  Cristina Azevedo; Thomas Livermore; Adolfo Saiardi
Journal:  Mol Cell       Date:  2015-03-12       Impact factor: 17.970

10.  Polyphosphate Functions In Vivo as an Iron Chelator and Fenton Reaction Inhibitor.

Authors:  François Beaufay; Ellen Quarles; Allison Franz; Olivia Katamanin; Wei-Yun Wholey; Ursula Jakob
Journal:  mBio       Date:  2020-07-28       Impact factor: 7.867

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  6 in total

Review 1.  Microbial storage and its implications for soil ecology.

Authors:  Kyle Mason-Jones; Serina L Robinson; G F Ciska Veen; Stefano Manzoni; Wim H van der Putten
Journal:  ISME J       Date:  2021-09-30       Impact factor: 10.302

2.  Inorganic Polyphosphate, Mitochondria, and Neurodegeneration.

Authors:  Pedro Urquiza; Maria E Solesio
Journal:  Prog Mol Subcell Biol       Date:  2022

Review 3.  The phosphate language of fungi.

Authors:  Kabir Bhalla; Xianya Qu; Matthias Kretschmer; James W Kronstad
Journal:  Trends Microbiol       Date:  2021-08-31       Impact factor: 17.079

4.  The Histone H1-Like Protein AlgP Facilitates Even Spacing of Polyphosphate Granules in Pseudomonas aeruginosa.

Authors:  Ravi Chawla; Steven Klupt; Vadim Patsalo; James R Williamson; Lisa R Racki
Journal:  mBio       Date:  2022-04-18       Impact factor: 7.786

5.  Ddp1 Cooperates with Ppx1 to Counter a Stress Response Initiated by Nonvacuolar Polyphosphate.

Authors:  Liam McCarthy; Iryna Abramchuk; Gamal Wafy; Alix Denoncourt; Mathieu Lavallée-Adam; Michael Downey
Journal:  mBio       Date:  2022-07-07       Impact factor: 7.786

6.  Targeting Polyphosphate Kinases in the Fight against Pseudomonas aeruginosa.

Authors:  Kanchi Baijal; Michael Downey
Journal:  mBio       Date:  2021-08-03       Impact factor: 7.867

  6 in total

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