Literature DB >> 33420205

Automated segmentation of endometrial cancer on MR images using deep learning.

Erlend Hodneland1,2,3, Julie A Dybvik4,5, Kari S Wagner-Larsen4,5, Veronika Šoltészová6,4, Antonella Z Munthe-Kaas4,7, Kristine E Fasmer4,5, Camilla Krakstad8,9, Arvid Lundervold4,10, Alexander S Lundervold4,11, Øyvind Salvesen12, Bradley J Erickson13, Ingfrid Haldorsen4,5.   

Abstract

Preoperative MR imaging in endometrial cancer patients provides valuable information on local tumor extent, which routinely guides choice of surgical procedure and adjuvant therapy. Furthermore, whole-volume tumor analyses of MR images may provide radiomic tumor signatures potentially relevant for better individualization and optimization of treatment. We apply a convolutional neural network for automatic tumor segmentation in endometrial cancer patients, enabling automated extraction of tumor texture parameters and tumor volume. The network was trained, validated and tested on a cohort of 139 endometrial cancer patients based on preoperative pelvic imaging. The algorithm was able to retrieve tumor volumes comparable to human expert level (likelihood-ratio test, [Formula: see text]). The network was also able to provide a set of segmentation masks with human agreement not different from inter-rater agreement of human experts (Wilcoxon signed rank test, [Formula: see text], [Formula: see text], and [Formula: see text]). An automatic tool for tumor segmentation in endometrial cancer patients enables automated extraction of tumor volume and whole-volume tumor texture features. This approach represents a promising method for automatic radiomic tumor profiling with potential relevance for better prognostication and individualization of therapeutic strategy in endometrial cancer.

Entities:  

Year:  2021        PMID: 33420205      PMCID: PMC7794479          DOI: 10.1038/s41598-020-80068-9

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  18 in total

1.  Man against machine: diagnostic performance of a deep learning convolutional neural network for dermoscopic melanoma recognition in comparison to 58 dermatologists.

Authors:  H A Haenssle; C Fink; R Schneiderbauer; F Toberer; T Buhl; A Blum; A Kalloo; A Ben Hadj Hassen; L Thomas; A Enk; L Uhlmann
Journal:  Ann Oncol       Date:  2018-08-01       Impact factor: 32.976

2.  Dermatologist-level classification of skin cancer with deep neural networks.

Authors:  Andre Esteva; Brett Kuprel; Roberto A Novoa; Justin Ko; Susan M Swetter; Helen M Blau; Sebastian Thrun
Journal:  Nature       Date:  2017-01-25       Impact factor: 49.962

3.  Family of boundary overlap metrics for the evaluation of medical image segmentation.

Authors:  Varduhi Yeghiazaryan; Irina Voiculescu
Journal:  J Med Imaging (Bellingham)       Date:  2018-02-19

4.  Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation.

Authors:  Konstantinos Kamnitsas; Christian Ledig; Virginia F J Newcombe; Joanna P Simpson; Andrew D Kane; David K Menon; Daniel Rueckert; Ben Glocker
Journal:  Med Image Anal       Date:  2016-10-29       Impact factor: 8.545

5.  Impact of Deep Learning Assistance on the Histopathologic Review of Lymph Nodes for Metastatic Breast Cancer.

Authors:  David F Steiner; Robert MacDonald; Yun Liu; Peter Truszkowski; Jason D Hipp; Christopher Gammage; Florence Thng; Lily Peng; Martin C Stumpe
Journal:  Am J Surg Pathol       Date:  2018-12       Impact factor: 6.394

6.  Deep Learning Based Analysis of Histopathological Images of Breast Cancer.

Authors:  Juanying Xie; Ran Liu; Joseph Luttrell; Chaoyang Zhang
Journal:  Front Genet       Date:  2019-02-19       Impact factor: 4.599

7.  18F-FDG PET/CT Quantitative Parameters and Texture Analysis Effectively Differentiate Endometrial Precancerous Lesion and Early-Stage Carcinoma.

Authors:  Tong Wang; Hongzan Sun; Yan Guo; Lue Zou
Journal:  Mol Imaging       Date:  2019 Jan-Dec       Impact factor: 4.488

8.  Advanced machine learning in action: identification of intracranial hemorrhage on computed tomography scans of the head with clinical workflow integration.

Authors:  Mohammad R Arbabshirani; Brandon K Fornwalt; Gino J Mongelluzzo; Jonathan D Suever; Brandon D Geise; Aalpen A Patel; Gregory J Moore
Journal:  NPJ Digit Med       Date:  2018-04-04

9.  Deep Learning to Assess Long-term Mortality From Chest Radiographs.

Authors:  Michael T Lu; Alexander Ivanov; Thomas Mayrhofer; Ahmed Hosny; Hugo J W L Aerts; Udo Hoffmann
Journal:  JAMA Netw Open       Date:  2019-07-03

10.  NiftyNet: a deep-learning platform for medical imaging.

Authors:  Eli Gibson; Wenqi Li; Carole Sudre; Lucas Fidon; Dzhoshkun I Shakir; Guotai Wang; Zach Eaton-Rosen; Robert Gray; Tom Doel; Yipeng Hu; Tom Whyntie; Parashkev Nachev; Marc Modat; Dean C Barratt; Sébastien Ourselin; M Jorge Cardoso; Tom Vercauteren
Journal:  Comput Methods Programs Biomed       Date:  2018-01-31       Impact factor: 5.428

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  8 in total

1.  Artificial intelligence-based technology for semi-automated segmentation of rectal cancer using high-resolution MRI.

Authors:  Atsushi Hamabe; Masayuki Ishii; Rena Kamoda; Saeko Sasuga; Koichi Okuya; Kenji Okita; Emi Akizuki; Yu Sato; Ryo Miura; Koichi Onodera; Masamitsu Hatakenaka; Ichiro Takemasa
Journal:  PLoS One       Date:  2022-06-17       Impact factor: 3.752

2.  Fully Automatic Whole-Volume Tumor Segmentation in Cervical Cancer.

Authors:  Erlend Hodneland; Satheshkumar Kaliyugarasan; Kari Strøno Wagner-Larsen; Njål Lura; Erling Andersen; Hauke Bartsch; Noeska Smit; Mari Kyllesø Halle; Camilla Krakstad; Alexander Selvikvåg Lundervold; Ingfrid Salvesen Haldorsen
Journal:  Cancers (Basel)       Date:  2022-05-11       Impact factor: 6.575

3.  The efficacy of deep learning models in the diagnosis of endometrial cancer using MRI: a comparison with radiologists.

Authors:  Aiko Urushibara; Tsukasa Saida; Kensaku Mori; Toshitaka Ishiguro; Kei Inoue; Tomohiko Masumoto; Toyomi Satoh; Takahito Nakajima
Journal:  BMC Med Imaging       Date:  2022-04-30       Impact factor: 2.795

Review 4.  Machine Learning for Endometrial Cancer Prediction and Prognostication.

Authors:  Vipul Bhardwaj; Arundhiti Sharma; Snijesh Valiya Parambath; Ijaz Gul; Xi Zhang; Peter E Lobie; Peiwu Qin; Vijay Pandey
Journal:  Front Oncol       Date:  2022-07-27       Impact factor: 5.738

5.  A deep learning-based automatic staging method for early endometrial cancer on MRI images.

Authors:  Wei Mao; Chunxia Chen; Huachao Gao; Liu Xiong; Yongping Lin
Journal:  Front Physiol       Date:  2022-08-30       Impact factor: 4.755

6.  Automatic segmentation of uterine endometrial cancer on multi-sequence MRI using a convolutional neural network.

Authors:  Yasuhisa Kurata; Mizuho Nishio; Yusaku Moribata; Aki Kido; Yuki Himoto; Satoshi Otani; Koji Fujimoto; Masahiro Yakami; Sachiko Minamiguchi; Masaki Mandai; Yuji Nakamoto
Journal:  Sci Rep       Date:  2021-07-14       Impact factor: 4.379

7.  Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network.

Authors:  Mizuho Nishio; Koji Fujimoto; Hidetoshi Matsuo; Chisako Muramatsu; Ryo Sakamoto; Hiroshi Fujita
Journal:  Front Artif Intell       Date:  2021-07-16

8.  A radiogenomics application for prognostic profiling of endometrial cancer.

Authors:  Erling A Hoivik; Erlend Hodneland; Julie A Dybvik; Kari S Wagner-Larsen; Kristine E Fasmer; Hege F Berg; Mari K Halle; Ingfrid S Haldorsen; Camilla Krakstad
Journal:  Commun Biol       Date:  2021-12-06
  8 in total

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