Literature DB >> 33419192

Modeling Root Exudate Accumulation Gradients to Estimate Net Exudation Rates by Peatland Soil Depth.

Cameron Proctor1, Yuhong He2.   

Abstract

Root exudates accumulate as a radial gradient around the root, yet little is known about variability at the individual root level. Vertical gradients in soil properties are hypothesized to cause greater accumulation of exudates in deeper soil through hindering diffusion, increasing sorption, and decreasing mineralization. To this end, a single root exudation model coupling concentration specific exudation and depth dependent soil properties was developed. The model was parameterized for a peatland ecosystem to explore deposition to the methanogen community. Numerical experiments indicate that exudates accumulated to a greater extent in deeper soil, albeit the effect was solute specific. Rhizosphere size for glucose doubled between the 10 and 80 cm depths, while the rhizoplane concentration was 1.23 times higher. Root influx of glucose increased from 1.431 to 1.758 nmol cm-1 hr-1, representing a recapture efficiency gain of 15.74% (i.e., 69.06% versus 84.8%). Driven by increased root influx, overall net exudation rates of select sugars and amino acids varied by a factor two. Model sensitivity analysis revealed that soil depth and root influx capability are key determinants of the rhizoplane concentration and subsequently net exudation, which determines whether effluxed compounds escape the root oxic shell and are available to the methanogen community.

Entities:  

Keywords:  peatlands; rhizosphere; root exudation; simulation model

Year:  2021        PMID: 33419192      PMCID: PMC7825507          DOI: 10.3390/plants10010106

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  17 in total

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Journal:  Trends Plant Sci       Date:  2002-04       Impact factor: 18.313

2.  Effect of temperature on heterotrophic glucose uptake, mineralization, and turnover rates in lake sediments.

Authors:  D F Toerien; B Cavari
Journal:  Appl Environ Microbiol       Date:  1982-01       Impact factor: 4.792

3.  Transporters in Arabidopsis roots mediating uptake of amino acids at naturally occurring concentrations.

Authors:  Henrik Svennerstam; Sandra Jämtgård; Iftikhar Ahmad; Kerstin Huss-Danell; Torgny Näsholm; Ulrika Ganeteg
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4.  Measurement of monosaccharides and conversion of glucose to acetate in anoxic rice field soil

Authors: 
Journal:  Appl Environ Microbiol       Date:  1999-06       Impact factor: 4.792

5.  Improved Cytoplasmic pH Regulation, Increased Lactate Efflux, and Reduced Cytoplasmic Lactate Levels Are Biochemical Traits Expressed in Root Tips of Whole Maize Seedlings Acclimated to a Low-Oxygen Environment.

Authors:  J. H. Xia; JKM. Roberts
Journal:  Plant Physiol       Date:  1994-06       Impact factor: 8.340

6.  Evaluation of methods to measure differential 15N labeling of soil and root N pools for studies of root exudation.

Authors:  Gerhard Hertenberger; Wolfgang Wanek
Journal:  Rapid Commun Mass Spectrom       Date:  2004       Impact factor: 2.419

7.  Measurement of the glucose permeation rate across phospholipid bilayers using small unilamellar vesicles. Effect of membrane composition and temperature.

Authors:  G J Bresseleers; H L Goderis; P P Tobback
Journal:  Biochim Biophys Acta       Date:  1984-05-30

Review 8.  Metal flux and dynamic speciation at (bio)interfaces. Part I: Critical evaluation and compilation of physicochemical parameters for complexes with simple ligands and fulvic/humic substances.

Authors:  Jacques Buffle; Zeshi Zhang; Konstantin Startchev
Journal:  Environ Sci Technol       Date:  2007-11-15       Impact factor: 9.028

9.  High resolution depth distribution of Bacteria, Archaea, methanotrophs, and methanogens in the bulk and rhizosphere soils of a flooded rice paddy.

Authors:  Hyo Jung Lee; Sang Eun Jeong; Pil Joo Kim; Eugene L Madsen; Che Ok Jeon
Journal:  Front Microbiol       Date:  2015-06-25       Impact factor: 5.640

10.  A New Method to Define the VI-Ts Diagram Using Subpixel Vegetation and Soil Information: A Case Study over a Semiarid Agricultural Region in the North China Plain.

Authors:  Zhigang Sun; Qinxue Wang; Bunkei Matsushita; Takehiko Fukushima; Zhu Ouyang; Masataka Watanabe
Journal:  Sensors (Basel)       Date:  2008-10-07       Impact factor: 3.576

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  1 in total

Review 1.  Trends in Microbial Community Composition and Function by Soil Depth.

Authors:  Dan Naylor; Ryan McClure; Janet Jansson
Journal:  Microorganisms       Date:  2022-02-28
  1 in total

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