Literature DB >> 33418552

Generalized neural decoders for transfer learning across participants and recording modalities.

Steven M Peterson1,2, Zoe Steine-Hanson3, Nathan Davis3, Rajesh P N Rao3,4,5, Bingni W Brunton1,2,6.   

Abstract

Objective. Advances in neural decoding have enabled brain-computer interfaces to perform increasingly complex and clinically-relevant tasks. However, such decoders are often tailored to specific participants, days, and recording sites, limiting their practical long-term usage. Therefore, a fundamental challenge is to develop neural decoders that can robustly train on pooled, multi-participant data and generalize to new participants.Approach. We introduce a new decoder, HTNet, which uses a convolutional neural network with two innovations: (a) a Hilbert transform that computes spectral power at data-driven frequencies and (b) a layer that projects electrode-level data onto predefined brain regions. The projection layer critically enables applications with intracranial electrocorticography (ECoG), where electrode locations are not standardized and vary widely across participants. We trained HTNet to decode arm movements using pooled ECoG data from 11 of 12 participants and tested performance on unseen ECoG or electroencephalography (EEG) participants; these pretrained models were also subsequently fine-tuned to each test participant.Main results. HTNet outperformed state-of-the-art decoders when tested on unseen participants, even when a different recording modality was used. By fine-tuning these generalized HTNet decoders, we achieved performance approaching the best tailored decoders with as few as 50 ECoG or 20 EEG events. We were also able to interpret HTNet's trained weights and demonstrate its ability to extract physiologically-relevant features.Significance. By generalizing to new participants and recording modalities, robustly handling variations in electrode placement, and allowing participant-specific fine-tuning with minimal data, HTNet is applicable across a broader range of neural decoding applications compared to current state-of-the-art decoders. Creative Commons Attribution license.

Entities:  

Keywords:  deep learning; neural decoding; spectral power; transfer learning

Mesh:

Year:  2021        PMID: 33418552     DOI: 10.1088/1741-2552/abda0b

Source DB:  PubMed          Journal:  J Neural Eng        ISSN: 1741-2552            Impact factor:   5.379


  4 in total

1.  Electrocorticography is superior to subthalamic local field potentials for movement decoding in Parkinson's disease.

Authors:  Robert Mark Richardson; Wolf-Julian Neumann; Timon Merk; Victoria Peterson; Witold J Lipski; Benjamin Blankertz; Robert S Turner; Ningfei Li; Andreas Horn
Journal:  Elife       Date:  2022-05-27       Impact factor: 8.713

2.  AJILE12: Long-term naturalistic human intracranial neural recordings and pose.

Authors:  Steven M Peterson; Satpreet H Singh; Benjamin Dichter; Michael Scheid; Rajesh P N Rao; Bingni W Brunton
Journal:  Sci Data       Date:  2022-04-21       Impact factor: 8.501

Review 3.  Harnessing the Power of Artificial Intelligence in Otolaryngology and the Communication Sciences.

Authors:  Blake S Wilson; Debara L Tucci; David A Moses; Edward F Chang; Nancy M Young; Fan-Gang Zeng; Nicholas A Lesica; Andrés M Bur; Hannah Kavookjian; Caroline Mussatto; Joseph Penn; Sara Goodwin; Shannon Kraft; Guanghui Wang; Jonathan M Cohen; Geoffrey S Ginsburg; Geraldine Dawson; Howard W Francis
Journal:  J Assoc Res Otolaryngol       Date:  2022-04-20

4.  Spatiotemporal dynamics of human high gamma discriminate naturalistic behavioral states.

Authors:  Abdulwahab Alasfour; Paolo Gabriel; Xi Jiang; Isaac Shamie; Lucia Melloni; Thomas Thesen; Patricia Dugan; Daniel Friedman; Werner Doyle; Orin Devinsky; David Gonda; Shifteh Sattar; Sonya Wang; Eric Halgren; Vikash Gilja
Journal:  PLoS Comput Biol       Date:  2022-08-08       Impact factor: 4.779

  4 in total

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