Literature DB >> 33411727

A multiscale model of complex endothelial cell dynamics in early angiogenesis.

Daria Stepanova1,2, Helen M Byrne3, Philip K Maini3, Tomás Alarcón1,2,4,5.   

Abstract

We introduce a hybrid two-dimensional multiscale model of angiogenesis, the process by which endothelial cells (ECs) migrate from a pre-existing vascular bed in response to local environmental cues and cell-cell interactions, to create a new vascular network. Recent experimental studies have highlighted a central role of cell rearrangements in the formation of angiogenic networks. Our model accounts for this phenomenon via the heterogeneous response of ECs to their microenvironment. These cell rearrangements, in turn, dynamically remodel the local environment. The model reproduces characteristic features of angiogenic sprouting that include branching, chemotactic sensitivity, the brush border effect, and cell mixing. These properties, rather than being hardwired into the model, emerge naturally from the gene expression patterns of individual cells. After calibrating and validating our model against experimental data, we use it to predict how the structure of the vascular network changes as the baseline gene expression levels of the VEGF-Delta-Notch pathway, and the composition of the extracellular environment, vary. In order to investigate the impact of cell rearrangements on the vascular network structure, we introduce the mixing measure, a scalar metric that quantifies cell mixing as the vascular network grows. We calculate the mixing measure for the simulated vascular networks generated by ECs of different lineages (wild type cells and mutant cells with impaired expression of a specific receptor). Our results show that the time evolution of the mixing measure is directly correlated to the generic features of the vascular branching pattern, thus, supporting the hypothesis that cell rearrangements play an essential role in sprouting angiogenesis. Furthermore, we predict that lower cell rearrangement leads to an imbalance between branching and sprout elongation. Since the computation of this statistic requires only individual cell trajectories, it can be computed for networks generated in biological experiments, making it a potential biomarker for pathological angiogenesis.

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Year:  2021        PMID: 33411727      PMCID: PMC7817011          DOI: 10.1371/journal.pcbi.1008055

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  85 in total

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Journal:  Biochim Biophys Acta       Date:  2004-03-04

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Authors:  David Bernstein
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Review 3.  The Link Between Angiogenesis and Endothelial Metabolism.

Authors:  Michael Potente; Peter Carmeliet
Journal:  Annu Rev Physiol       Date:  2016-12-15       Impact factor: 19.318

4.  Nonlinear Elasticity of the ECM Fibers Facilitates Efficient Intercellular Communication.

Authors:  Ran S Sopher; Hanan Tokash; Sari Natan; Mirit Sharabi; Ortal Shelah; Oren Tchaicheeyan; Ayelet Lesman
Journal:  Biophys J       Date:  2018-08-15       Impact factor: 4.033

5.  A mathematical model of tumour-induced capillary growth.

Authors:  D Balding; D L McElwain
Journal:  J Theor Biol       Date:  1985-05-07       Impact factor: 2.691

6.  Pericytes enable effective angiogenesis in the presence of proinflammatory signals.

Authors:  Tae-Yun Kang; Federico Bocci; Mohit Kumar Jolly; Herbert Levine; José Nelson Onuchic; Andre Levchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-04       Impact factor: 11.205

7.  Dynamic endothelial cell rearrangements drive developmental vessel regression.

Authors:  Claudio A Franco; Martin L Jones; Miguel O Bernabeu; Ilse Geudens; Thomas Mathivet; Andre Rosa; Felicia M Lopes; Aida P Lima; Anan Ragab; Russell T Collins; Li-Kun Phng; Peter V Coveney; Holger Gerhardt
Journal:  PLoS Biol       Date:  2015-04-17       Impact factor: 8.029

8.  Matrix density mediates polarization and lumen formation of endothelial sprouts in VEGF gradients.

Authors:  Amir Shamloo; Sarah C Heilshorn
Journal:  Lab Chip       Date:  2010-09-01       Impact factor: 6.799

9.  Mechanical cell-matrix feedback explains pairwise and collective endothelial cell behavior in vitro.

Authors:  René F M van Oers; Elisabeth G Rens; Danielle J LaValley; Cynthia A Reinhart-King; Roeland M H Merks
Journal:  PLoS Comput Biol       Date:  2014-08-14       Impact factor: 4.475

10.  Notch signaling and taxis mechanisms regulate early stage angiogenesis: A mathematical and computational model.

Authors:  Rocío Vega; Manuel Carretero; Rui D M Travasso; Luis L Bonilla
Journal:  PLoS Comput Biol       Date:  2020-01-27       Impact factor: 4.475

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  4 in total

1.  Computational model of brain endothelial cell signaling pathways predicts therapeutic targets for cerebral pathologies.

Authors:  Catherine M Gorick; Jeffrey J Saucerman; Richard J Price
Journal:  J Mol Cell Cardiol       Date:  2021-11-16       Impact factor: 5.000

Review 2.  Systems biology of angiogenesis signaling: Computational models and omics.

Authors:  Yu Zhang; Hanwen Wang; Rebeca Hannah M Oliveira; Chen Zhao; Aleksander S Popel
Journal:  WIREs Mech Dis       Date:  2021-12-30

3.  The role of calcium oscillations in the phenotype selection in endothelial cells.

Authors:  Birses Debir; Cameron Meaney; Mohammad Kohandel; M Burcin Unlu
Journal:  Sci Rep       Date:  2021-12-10       Impact factor: 4.379

4.  A multiscale cell-based model of tumor growth for chemotherapy assessment and tumor-targeted therapy through a 3D computational approach.

Authors:  Sahar Jafari Nivlouei; Madjid Soltani; Ebrahim Shirani; Mohammad Reza Salimpour; Rui Travasso; João Carvalho
Journal:  Cell Prolif       Date:  2022-02-07       Impact factor: 6.831

  4 in total

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