| Literature DB >> 33409320 |
Depison Depison1, Widiya P B Putra2, Gushairiyanto Gushairiyanto1, Yun Alwi1, Heni Suryani1.
Abstract
OBJECTIVE: The objective of this study was to characterize Kacang goats (aged 1-2 years) in the highland (group 1) and lowland (group 2) areas of Jambi Province based on their body measurements and body indices.Entities:
Keywords: Kacang goat; canonical correlation; cluster; morphometric traits; principal component
Year: 2020 PMID: 33409320 PMCID: PMC7774786 DOI: 10.5455/javar.2020.g475
Source DB: PubMed Journal: J Adv Vet Anim Res ISSN: 2311-7710
Figure 1.The Kacang goat population in Jambi Province, Indonesia, in the lowland areas (Batanghari and Muaro Jambi regions) and the highland areas (Kerinci and Sungai Penuh regions).
Figure 2.The body measurement scheme for Kacang goats consisting of BL (a), WH (b), CG (c), CD (d), RH (e), CC (f), chest width (g) and RW (h).
The average morphostuctural characteristics of Kacang goats in two different areas.
| Parameter | Lowland | Highland | |||||
|---|---|---|---|---|---|---|---|
| Buck (80) | Doe (80) | Total (160) | Buck (80) | Doe (80) | Total (160) | ||
| BW (kg) | 18.05 ± 2.82 | 16.35 ± 2.59 | 17.20 ± 2.83a | 19.95 ± 2.90 | 17.34 ± 3.63 | 18.64 ± 3.53b | |
| Body measurements (cm) | |||||||
| BL | 51.93 ± 3.29 | 50.23 ± 2.54 | 51.08 ± 3.05 | 53.03 ± 3.01 | 51.31 ± 2.11 | 52.17 ± 2.73 | |
| WH | 50.58 ± 2.52 | 48.45 ± 2.17 | 49.52 ± 2.58 | 52.07 ± 2.79 | 49.63 ± 2.22 | 50.85 ± 2.79 | |
| CG | 58.09 ± 2.51 | 56.28 ± 2.46 | 57.18 ± 2.64 | 59.08 ± 2.48 | 57.28 ± 2.58 | 58.18 ± 2.68 | |
| CD | 23.42 ± 2.79 | 20.63 ± 3.06 | 22.02 ± 3.24 | 24.42 ± 2.56 | 22.25 ± 2.99 | 23.34 ± 2.99 | |
| SW | 12.14 ± 2.29 | 10.12 ± 2.71 | 11.13 ± 2.70 | 13.58 ± 2.26 | 11.27 ± 2.42 | 12.42 ± 2.60 | |
| RH | 52.61 ± 2.12 | 50.12 ± 2.61 | 51.36 ± 2.68 | 53.92 ± 2.26 | 52.06 ± 2.94 | 52.99 ± 2.78 | |
| RW | 11.73 ± 1.73 | 10.48 ± 2.54 | 11.10 ± 2.26 | 12.83 ± 2.21 | 11.27 ± 2.33 | 12.05 ± 2.40 | |
| CC | 6.80 ± 1.96 | 5.52 ± 2.44 | 6.15 ± 2.30 | 7.90 ± 1.73 | 6.19 ± 2.51 | 7.05 ± 2.31 | |
| Body indices | |||||||
| LI | 102.65 ± 3.76 | 103.77 ± 4.90 | 103.21 ± 4.48 | 101.89 ± 4.09 | 103.49 ± 4.48 | 102.59 ± 4.34 | |
| TI | 51.55 ± 4.93 | 49.51 ± 12.33 | 50.53 ± 9.46 | 55.37 ± 5.13 | 51.08 ± 10.99 | 53.22 ± 8.77 | |
| DI | 46.20 ± 4.02 | 42.51 ± 5.53 | 44.36 ± 5.14 | 46.85 ± 3.61 | 44.80 ± 5.54 | 45.83 ± 4.75 | |
| HI | 96.14 ± 2.39 | 96.77 ± 3.55 | 96.45 ± 3.07 | 96.58 ± 3.18 | 95.46 ± 3.86 | 96.02 ± 3.56 | |
| TD | 114.92 ± 3.01 | 116.29 ± 5.08 | 115.60 ± 4.26 | 113.57 ± 3.88 | 115.46 ± 3.44 | 114.52 ± 3.77 | |
| DTI | 11.62 ± 2.61 | 9.71 ± 3.94 | 10.67 ± 3.55 | 13.31 ± 2.46 | 10.75 ± 4.15 | 12.03 ± 3.63 | |
| CI | 66.76 ± 3.62 | 65.50 ± 4.96 | 66.13 ± 4.35 | 67.10 ± 3.84 | 66.17 ± 4.10 | 66.63 ± 3.97 | |
| RCI | 13.34 ± 2.97 | 11.32 ± 4.80 | 12.33 ± 4.17 | 15.10 ± 2.67 | 12.42 ± 4.85 | 13.76 ± 4.11 | |
| IBW | 35.52 ± 4.09 | 33.66 ± 4.57 | 34.59 ± 4.44 | 38.17 ± 4.23 | 34.76 ± 6.22 | 36.47 ± 5.56 | |
| BI | 89.34 ± 2.76 | 89.32 ± 4.30 | 89.33 ± 3.63 | 89.72 ± 2.58 | 89.63 ± 2.89 | 89.68 ± 2.72 | |
| Pr | 97.55 ± 3.65 | 96.59 ± 4.68 | 97.07 ± 4.30 | 98.32 ± 4.36 | 96.81 ± 4.22 | 97.56 ± 4.33 | |
| AI | 2,633.54 ± 273.16 | 2,436.09 ± 197.11 | 2,534.81 ± 260.13 | 2,767.12 ± 275.20 | 2,548.77 ± 189.85 | 2,657.94 ± 259.58 | |
Different letters (a, b) in the same rows indicate significant differences (p < 0.05).
Pearson’s correlations between BW and body measurements of Kacang goats in lowland (above diagonal) and highland (below diagonal) areas.
| Body measurements | BW | BL | WH | CG | CD | SW | RH | RW | CC |
|---|---|---|---|---|---|---|---|---|---|
| BW | – | 0.76 | 0.79 | 0.81 | 0.75 | 0.77 | 0.76 | 0.68 | 0.76 |
| BL | 0.78 | – | 0.70 | 0.75 | 0.71 | 0.62 | 0.66 | 0.57 | 0.53 |
| WH | 0.79 | 0.67 | – | 0.72 | 0.71 | 0.66 | 0.81 | 0.65 | 0.57 |
| CG | 0.93 | 0.82 | 0.79 | – | 0.81 | 0.73 | 0.73 | 0.67 | 0.68 |
| CD | 0.76 | 0.63 | 0.63 | 0.72 | – | 0.66 | 0.71 | 0.71 | 0.62 |
| SW | 0.74 | 0.66 | 0.71 | 0.76 | 0.67 | – | 0.71 | 0.67 | 0.76 |
| RH (HH) | 0.84 | 0.75 | 0.76 | 0.91 | 0.66 | 0.75 | – | 0.61 | 0.57 |
| RW | 0.70 | 0.62 | 0.66 | 0.74 | 0.69 | 0.68 | 0.68 | – | 0.67 |
| CC | 0.56 | 0.53 | 0.58 | 0.61 | 0.51 | 0.64 | 0.59 | 0.61 | – |
Pearson’s correlations between BW and body indices of Kacang goats in lowland (above diagonal) and highland (below diagonal) areas.
| Body indices | BW | LI | TI | DI | HI | TD | DTI | CI | RCI | IBW | BI | Pr | AI |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BW | – | 0.11 | 0.37 | 0.58 | 0.05 | −0.11 | 0.72 | 0.51 | 0.70 | 0.97 | 0.20 | −0.10 | 0.84 |
| LI | −0.04 | – | −0.03 | 0.26 | −0.26 | 0.49 | 0.03 | 0.39 | 0.09 | 0.23 | 0.62 | −0.99 | 0.20 |
| TI | 0.35 | −0.07 | – | −0.13 | −0.09 | −0.03 | 0.43 | 0.17 | 0.43 | 0.37 | −0.01 | 0.05 | 0.25 |
| DI | 0.51 | 0.20 | −0.20 | – | −0.15 | 0.21 | 0.46 | 0.60 | 0.49 | 0.56 | 0.08 | −0.27 | 0.57 |
| HI | −0.03 | −0.58 | −0.06 | −0.25 | – | −0.45 | 0.01 | −0.27 | −0.05 | −0.06 | 0.13 | 0.27 | 0.20 |
| TD | −0.01 | 0.70 | −0.07 | 0.27 | −0.81 | – | 0.01 | 0.73 | 0.13 | 0.07 | −0.37 | −0.50 | −0.29 |
| DTI | 0.46 | −0.09 | 0.39 | 0.28 | 0.03 | −0.13 | – | 0.43 | 0.99 | 0.69 | 0.03 | −0.03 | 0.56 |
| CI | 0.72 | 0.39 | 0.30 | 0.51 | −0.54 | 0.63 | 0.32 | – | 0.52 | 0.57 | −0.23 | −0.41 | 0.40 |
| RCI | 0.45 | −0.01 | 0.39 | 0.30 | −0.07 | −0.01 | 0.99 | 0.39 | – | 0.70 | −0.01 | −0.10 | 0.52 |
| IBW | 0.97 | 0.11 | 0.29 | 0.55 | −0.18 | 0.19 | 0.37 | 0.78 | 0.39 | − | 0.10 | −0.23 | 0.71 |
| BI | −0.04 | 0.65 | −0.01 | −0.01 | 0.06 | −0.09 | 0.02 | −0.12 | −0.01 | −0.04 | − | −0.61 | 0.47 |
| Pr | 0.04 | −0.99 | 0.06 | −0.20 | 0.58 | −0.69 | 0.08 | −0.38 | 0.01 | −0.11 | −0.65 | – | −0.20 |
| AI |
AI = Area.
indicates significant difference.
Eigenvalues, total variance, cumulative, commonalities, KMO measure of sampling adequacy and Bartlett’s test of sphericity in the body measurements of Kacang goats in two different areas.
| Body measurements | Lowland | Highland | ||
|---|---|---|---|---|
| PC1 | Com. | PC1 | Com. | |
| BW | 0.92 | 0.85 | 0.93 | 0.86 |
| BL | 0.82 | 0.67 | 0.84 | 0.71 |
| WH | 0.86 | 0.74 | 0.86 | 0.73 |
| CG | 0.89 | 0.81 | 0.95 | 0.90 |
| CD | 0.87 | 0.76 | 0.81 | 0.66 |
| SW | 0.85 | 0.73 | 0.86 | 0.74 |
| RH | 0.86 | 0.73 | 0.91 | 0.82 |
| RW | 0.81 | 0.65 | 0.83 | 0.68 |
| CC | 0.80 | 0.64 | 0.72 | 0.52 |
| Eigenvalues | 6.57 | – | 6.61 | – |
| Variance (%) | 73.0 | – | 73.5 | – |
| Cumulative (%) | 73.0 | – | 73.5 | – |
| KMO | 0.93 | 0.94 | ||
| Bartlett’s test | ||||
Com.: communality.
indicates very significant difference.
Figure 3.The component plot of body indices in Kacang goats based on a rotated component matrix.
Factors selected by stepwise discriminant analysis to characterize Kacang goats in two different areas.
| Factor/Step | Variables entered | Tolerance | Fremove | D2 | Wilk’s λ |
|---|---|---|---|---|---|
| Body measurements ( | |||||
| Step 1 | RH | 1.00 | 28.76 | 0.36 | 0.92 |
| Body indices ( | |||||
| Step 1 | AI | 0.91 | 13.14 | 0.22 | 0.95 |
| Step 2 | IBW | 0.61 | 11.41 | 0.24 | 0.94 |
| Step 3 | TD | 0.57 | 8.91 | 0.28 | 0.93 |
D2 = Mahalanobis distance; rc = canonical correlation.
Percentage (%) of individual classification per breed based on discriminant analysis.
| Factors | Area | Predicted group membership ( | Total ( | |
|---|---|---|---|---|
| Lowland | Highland | |||
| Morphometric | Lowland | 59.4 (95) | 40.6 (65) | 100.0 (160) |
| Highland | 39.4 (63) | 60.6 (97) | 100.0 (160) | |
| Body indices | Lowland | 48.8 (78) | 51.2 (82) | 100.0 (160) |
| Highland | 38.8 (62) | 61.2 (98) | 100.0 (160) | |
N: number of animals
Figure 4.The canonical discriminant plot of the body measurements and body indices characterizing Kacang goats in two different area.
Figure 5.Dendrogram based on distances among Kacang populations based on BW, body measurements and body indices.
Eigenvalues, total variance, cumulative, commonalities, KMO measure of sampling adequacy and Bartlett’s test of sphericity in the body indices of Kacang goats in two different areas.
| Body indices | Lowland | Highland | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| PC1 | PC2 | PC3 | PC4 | Com. | PC1 | PC2 | PC3 | PC4 | Com. | |
| LI | 0.10 | 0.91 | 0.37 | −0.06 | 0.98 | 0.62 | −0.06 | 0.08 | 0.77 | 0.99 |
| TI | 0.32 | −0.03 | 0.05 | 0.87 | 0.86 | 0.06 | 0.79 | −0.11 | −0.05 | 0.65 |
| DI | 0.73 | 0.13 | 0.18 | −0.50 | 0.83 | 0.17 | −0.09 | 0.84 | 0.03 | 0.75 |
| HI | 0.05 | −0.12 | −0.67 | −0.17 | 0.49 | −0.91 | −0.04 | −0.08 | −0.06 | 0.84 |
| TD | 0.04 | 0.11 | 0.95 | −0.12 | 0.94 | 0.96 | −0.11 | 0.12 | 0.09 | 0.96 |
| DTI | 0.87 | −0.07 | 0.01 | 0.30 | 0.86 | −0.09 | 0.84 | 0.28 | −0.01 | 0.80 |
| CI | 0.63 | 0.08 | 0.67 | −0.15 | 0.88 | 0.59 | 0.33 | 0.67 | −0.02 | 0.90 |
| RCI | 0.87 | −0.05 | 0.13 | 0.28 | 0.86 | 0.02 | 0.84 | 0.30 | 0.001 | 0.79 |
| IBW | 0.86 | 0.17 | 0.04 | 0.12 | 0.78 | 0.13 | 0.32 | 0.84 | −0.02 | 0.82 |
| BI | 0.07 | 0.87 | −0.47 | 0.05 | 0.98 | −0.16 | 0.03 | −0.02 | 0.98 | 0.99 |
| Pr | 0.80 | 0.31 | −0.36 | −0.05 | 0.86 | −0.33 | 0.52 | 0.68 | 0.19 | 0.87 |
| AI | −0.10 | −0.91 | −0.38 | 0.07 | 0.98 | −0.62 | 0.06 | −0.08 | −0.78 | 0.99 |
| Eigenvalues | 4.43 | 2.62 | 2.11 | 1.14 | – | 4.12 | 3.31 | 1.70 | 1.21 | – |
| Variance (%) | 36.93 | 21.83 | 17.57 | 9.49 | – | 34.32 | 27.61 | 14.19 | 10.07 | – |
| Cumulative (%) | 36.93 | 58.76 | 76.33 | 85.82 | – | 34.32 | 61.93 | 76.12 | 86.19 | – |
| KMO | 0.55 | 0.51 | ||||||||
| Bartlett’s test | ** | ** | ||||||||
Com. = communality.
Main component.
Genetic distance (Centimorgan cM) between Kacang goats from different populations based on BW, body measurements, and body indices.
| Population | Kerinci | Sungai Penuh | Muaro Jambi | Batanghari |
|---|---|---|---|---|
| Kerinci | 0.00 | 7.46 | 8.21 | 8.94 |
| Sungai Penuh | – | 0.00 | 4.79 | 4.27 |
| Muaro Jambi | – | – | 0.00 | 2.81 |
| Batanghari | – | – | – | 0.00 |