Literature DB >> 33406153

Implementation of the new integrated algorithm for diagnosis of drug-resistant tuberculosis in Karnataka State, India: How well are we doing?

Uma Shankar S1, Ajay M V Kumar2,3,4, Nikhil Srinivasapura Venkateshmurthy5,6, Divya Nair7, Reena Kingsbury1, Padmesha R1, Magesh Velu1, Suganthi P1, Joydev Gupta1, Jameel Ahmed1, Puttaswamy G1, Somashekarayya Hiremath1, Ravi K Jaiswal1, Rony Jose Kokkad1, Somashekar N1.   

Abstract

BACKGROUND: As per national policy, all diagnosed tuberculosis patients in India are to be tested using Xpert® MTB/RIF assay at the district level to diagnose rifampicin resistance. Regardless of the result, samples are transported to the reference laboratories for further testing: first-line Line Probe Assay (FL-LPA) for rifampicin-sensitive samples and second-line LPA(SL-LPA) for rifampicin-resistant samples. Based on the results, samples undergo culture and phenotypic drug susceptibility testing. We assessed among patients diagnosed with tuberculosis at 13 selected Xpert laboratories of Karnataka state, India, i) the proportion whose samples reached the reference laboratories and among them, proportion who completed the diagnostic algorithm ii) factors associated with non-reaching and non-completion and iii) the delays involved.
METHODS: This was a cohort study involving review of programme records. For each TB patient diagnosed between 1st July and 31st August 2018 at the Xpert laboratory, we tracked the laboratory register at the linked reference laboratory until 30th September (censor date) using Nikshay ID (a unique patient identifier), phone number, name, age and sex.
RESULTS: Of 1660 TB patients, 1208(73%) samples reached the reference laboratories and among those reached, 1124(93%) completed the algorithm. Of 1590 rifampicin-sensitive samples, 1170(74%) reached and 1104(94%) completed the algorithm. Of 64 rifampicin-resistant samples, only 35(55%) reached and 17(49%) completed the algorithm. Samples from rifampicin-resistant TB, extra-pulmonary TB and two districts were less likely to reach the reference laboratory. Non-completion was more likely among rifampicin-resistant TB and sputum-negative samples. The median time for conducting and reporting results of Xpert® MTB/RIF was one day, of FL-LPA 5 days and of SL-LPA16 days.
CONCLUSION: These findings are encouraging given the complexity of the algorithm. High non-reaching and non-completion rates in rifampicin-resistant patients is a major concern. Future research should focus on understanding the reasons for the gaps identified using qualitative research methods.

Entities:  

Year:  2021        PMID: 33406153      PMCID: PMC7787455          DOI: 10.1371/journal.pone.0244785

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  9 in total

1.  Pre-diagnosis attrition in patients with presumptive MDR-TB in Bhopal, India, 2015: a follow-up study.

Authors:  S Natrajan; A R Singh; H D Shewade; M Verma; S Bali
Journal:  Public Health Action       Date:  2018-06-21

Review 2.  Laboratory Diagnosis of Extra-pulmonary Tuberculosis (EPTB) in Resource-constrained Setting: State of the Art, Challenges and the Need.

Authors:  Manju Purohit; Tehmina Mustafa
Journal:  J Clin Diagn Res       Date:  2015-04-01

3.  Delay and attrition before treatment initiation among MDR-TB patients in five districts of Gujarat, India.

Authors:  H D Shewade; K S Shringarpure; M Parmar; N Patel; S Kuriya; S Shihora; N Ninama; N Gosai; R Khokhariya; C Popat; H Thanki; B Modi; P Dave; R K Baxi; A M V Kumar
Journal:  Public Health Action       Date:  2018-06-21

4.  Use of Xpert MTB/RIF in Decentralized Public Health Settings and Its Effect on Pulmonary TB and DR-TB Case Finding in India.

Authors:  Kuldeep Singh Sachdeva; Neeraj Raizada; Achuthan Sreenivas; Anna H Van't Hoog; Susan van den Hof; Puneet K Dewan; Rahul Thakur; R S Gupta; Shubhangi Kulsange; Bhavin Vadera; Ameet Babre; Christen Gray; Malik Parmar; Mayank Ghedia; Ranjani Ramachandran; Umesh Alavadi; Nimalan Arinaminpathy; Claudia Denkinger; Catharina Boehme; C N Paramasivan
Journal:  PLoS One       Date:  2015-05-21       Impact factor: 3.240

Review 5.  Diagnosis and treatment of extrapulmonary tuberculosis.

Authors:  Ji Yeon Lee
Journal:  Tuberc Respir Dis (Seoul)       Date:  2015-04-02

6.  Epidemiology, Diagnosis and Management of Extra-Pulmonary Tuberculosis in a Low-Prevalence Country: A Four Year Retrospective Study in an Australian Tertiary Infectious Diseases Unit.

Authors:  Simon Pollett; Pamela Banner; Matthew V N O'Sullivan; Anna P Ralph
Journal:  PLoS One       Date:  2016-03-10       Impact factor: 3.240

Review 7.  The Tuberculosis Cascade of Care in India's Public Sector: A Systematic Review and Meta-analysis.

Authors:  Ramnath Subbaraman; Ruvandhi R Nathavitharana; Srinath Satyanarayana; Madhukar Pai; Beena E Thomas; Vineet K Chadha; Kiran Rade; Soumya Swaminathan; Kenneth H Mayer
Journal:  PLoS Med       Date:  2016-10-25       Impact factor: 11.069

8.  Delays and loss to follow-up before treatment of drug-resistant tuberculosis following implementation of Xpert MTB/RIF in South Africa: A retrospective cohort study.

Authors:  Helen Cox; Lindy Dickson-Hall; Norbert Ndjeka; Anja Van't Hoog; Alison Grant; Frank Cobelens; Wendy Stevens; Mark Nicol
Journal:  PLoS Med       Date:  2017-02-21       Impact factor: 11.069

9.  High pre-diagnosis attrition among patients with presumptive MDR-TB: an operational research from Bhopal district, India.

Authors:  Hemant Deepak Shewade; Arun M Kokane; Akash Ranjan Singh; Manoj Verma; Malik Parmar; Ashish Chauhan; Sanjay Singh Chahar; Manoj Tiwari; Sheeba Naz Khan; Vivek Gupta; Jaya Prasad Tripathy; Mukesh Nagar; Sanjai Kumar Singh; Pradeep Kumar Mehra; Ajay Mv Kumar
Journal:  BMC Health Serv Res       Date:  2017-04-04       Impact factor: 2.655

  9 in total
  3 in total

1.  Mycobacterium tuberculosis Lineages Associated with Mutations and Drug Resistance in Isolates from India.

Authors:  Siva Kumar Shanmugam; Narender Kumar; Tamilzhalagan Sembulingam; Suresh Babu Ramalingam; Ashok Selvaraj; Udhayakumar Rajendhiran; Sudha Solaiyappan; Srikanth P Tripathy; Mohan Natrajan; Padmapriyadarsini Chandrasekaran; Soumya Swaminathan; Julian Parkhill; Sharon J Peacock; Uma Devi K Ranganathan
Journal:  Microbiol Spectr       Date:  2022-04-20

2.  Status of drug resistant tuberculosis among patients attending a tuberculosis unit of West Bengal: A record based cross-sectional study.

Authors:  Rekha Dutt; Ritesh Singh; Jitendra Majhi; Gandhari Basu
Journal:  J Family Med Prim Care       Date:  2022-01-31

3.  Head-to-Head Comparison between Xpert MTB/RIF Assay and Real-Time Polymerase Chain Reaction Assay Using Bronchial Washing Specimens for Tuberculosis Diagnosis.

Authors:  Eunjeong Son; Jinook Jang; Taehwa Kim; Jin Ho Jang; Jae Heun Chung; Hee Yun Seol; Hye Ju Yeo; Seong Hoon Yoon; Seung Eun Lee; Woo Hyun Cho; Yun Seong Kim; Doosoo Jeon
Journal:  Tuberc Respir Dis (Seoul)       Date:  2021-11-02
  3 in total

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