Literature DB >> 33405341

Identification of differentially expressed circular RNAs in keloid and normal skin tissue by high-throughput sequencing.

Jing Zhang1, Ninghua Liu1, Xiufa Wu2, Peixuan Wu3, Nan Song1, Jing Ma1,2.   

Abstract

Keloid is a kind of pathological skin scar with unclear molecular pathology. Circular RNAs (circRNAs) are involved in the occurrence and development of many diseases; however, their relationship with keloid is not well understood. To investigate the involvement of dysregulated circRNAs in keloid. Thirty-seven keloids and 37 normal skin tissues were collected, and the changes of circRNAs, microRNAs (miRNAs) and mRNAs in 3 keloids and 3 normal samples by high-throughput sequencing were detected first. Based on the circRNA-miRNA-mRNA interaction network construction, gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis combining several signaling pathways associated with keloid formation and progression, the circRNAs required further verification were screened out. The expression levels of the selected circRNAs were verified in 37 keloids and 37 normal skin tissues using quantitative real-time polymerase chain reaction (QPCR). The interaction of candidate circRNA and its predicted binding miRNA was tested by dual-luciferase reporter gene experiment. Compared with normal controls, there was an average of 120 and 12 circRNAs, 44 and 63 miRNAs, 656 and 156 mRNAs were upregulated and downregulated, respectively, in keloids. According to the analysis of bioinformation, six circRNAs were picked out. The QPCR validation results of two upregulated circRNAs (hsa_circ_0001320 and circCOL5A1) were consistent with previous sequencing results. The interaction between hsa_circ_0001320 and miR-574-5p was confirmed. This study makes it clear that the abnormal expression of circRNAs may be related to the pathological process of keloid.
© 2021 Wiley Periodicals LLC.

Keywords:  circular RNA; epigenetics; high-throughput sequencing; keloid; pathway

Year:  2021        PMID: 33405341     DOI: 10.1111/dth.14745

Source DB:  PubMed          Journal:  Dermatol Ther        ISSN: 1396-0296            Impact factor:   2.851


  5 in total

1.  Effect of miR-451 on IVF/ICSI-ET outcome in patient with endometriosis and infertility.

Authors:  Lei Wang; Jing Zhang; Hairu Sun; Xuexia Ji; Shuzhen Zhang
Journal:  Am J Transl Res       Date:  2021-11-15       Impact factor: 4.060

2.  Analyses of circRNA and mRNA Profiles in Vogt-Koyanagi-Harada Disease.

Authors:  Jia Shu; Guannan Su; Jun Zhang; Zhangluxi Liu; Rui Chang; Qingfeng Wang; Peizeng Yang
Journal:  Front Immunol       Date:  2021-12-22       Impact factor: 7.561

3.  Circular RNA hsa_circ_0057452 facilitates keloid progression by targeting the microRNA-1225-3p/AF4/FMR2 family member 4 axis.

Authors:  Hu Gao; Zhen Hu; Xiangming Zhang
Journal:  Bioengineered       Date:  2022-05       Impact factor: 6.832

Review 4.  circRNA: Regulatory factors and potential therapeutic targets in inflammatory dermatoses.

Authors:  Ruifeng Liu; Luyao Zhang; Xincheng Zhao; Jia Liu; Wenjuan Chang; Ling Zhou; Kaiming Zhang
Journal:  J Cell Mol Med       Date:  2022-06-29       Impact factor: 5.295

5.  Silencing circular RNAPTPN12 promoted the growth of keloid fibroblasts by activating Wnt signaling pathway via targeting microRNA-21-5p.

Authors:  Fei Liu; Tao Li; Xiaoan Zhan
Journal:  Bioengineered       Date:  2022-02       Impact factor: 3.269

  5 in total

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