Literature DB >> 33401298

Flipping the script: viral capitalization of RNA modifications.

Matthew T Sacco, Stacy M Horner.   

Abstract

RNA encoded by RNA viruses is highly regulated so that it can function in multiple roles during the viral life cycle. These roles include serving as the mRNA template for translation or the genetic material for replication as well as being packaged into progeny virions. RNA modifications provide an emerging regulatory dimension to the RNA of viruses. Modification of the viral RNA can increase the functional genomic capacity of the RNA viruses without the need to encode and translate additional genes. Further, RNA modifications can facilitate interactions with host or viral RNA-binding proteins that promote replication or can prevent interactions with antiviral RNA-binding proteins. The mechanisms by which RNA viruses facilitate modification of their RNA are diverse. In this review, we discuss some of these mechanisms, including exploring the unknown mechanism by which the RNA of viruses that replicate in the cytoplasm could acquire the RNA modification N6-methyladenosine.
© The Author(s) 2021. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

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Keywords:  2’-O methylation; N6-methyladenosine; N7-methylguanosine; RNA modifications; RNA viruses

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Year:  2021        PMID: 33401298      PMCID: PMC8008163          DOI: 10.1093/bfgp/elaa025

Source DB:  PubMed          Journal:  Brief Funct Genomics        ISSN: 2041-2649            Impact factor:   4.241


  93 in total

1.  Cytoplasmic m6A reader YTHDF3 promotes mRNA translation.

Authors:  Ang Li; Yu-Sheng Chen; Xiao-Li Ping; Xin Yang; Wen Xiao; Ying Yang; Hui-Ying Sun; Qin Zhu; Poonam Baidya; Xing Wang; Devi Prasad Bhattarai; Yong-Liang Zhao; Bao-Fa Sun; Yun-Gui Yang
Journal:  Cell Res       Date:  2017-01-20       Impact factor: 25.617

2.  The U6 snRNA m6A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention.

Authors:  Kathryn E Pendleton; Beibei Chen; Kuanqing Liu; Olga V Hunter; Yang Xie; Benjamin P Tu; Nicholas K Conrad
Journal:  Cell       Date:  2017-05-18       Impact factor: 41.582

3.  Studies on virus-specific nucleic acids synthesized in vertebrate and mosquito cells infected with flaviviruses.

Authors:  G Wengler; G Wengler; H J Gross
Journal:  Virology       Date:  1978-09       Impact factor: 3.616

4.  Nuclear m(6)A Reader YTHDC1 Regulates mRNA Splicing.

Authors:  Wen Xiao; Samir Adhikari; Ujwal Dahal; Yu-Sheng Chen; Ya-Juan Hao; Bao-Fa Sun; Hui-Ying Sun; Ang Li; Xiao-Li Ping; Wei-Yi Lai; Xing Wang; Hai-Li Ma; Chun-Min Huang; Ying Yang; Niu Huang; Gui-Bin Jiang; Hai-Lin Wang; Qi Zhou; Xiu-Jie Wang; Yong-Liang Zhao; Yun-Gui Yang
Journal:  Mol Cell       Date:  2016-02-11       Impact factor: 17.970

5.  Influenza virus PB1 protein is the minimal and essential subunit of RNA polymerase.

Authors:  M Kobayashi; T Toyoda; A Ishihama
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

6.  The NS 3 nonstructural protein of flaviviruses contains an RNA triphosphatase activity.

Authors:  G Wengler; G Wengler
Journal:  Virology       Date:  1993-11       Impact factor: 3.616

7.  Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d.

Authors:  Philip Knuckles; Tina Lence; Irmgard U Haussmann; Dominik Jacob; Nastasja Kreim; Sarah H Carl; Irene Masiello; Tina Hares; Rodrigo Villaseñor; Daniel Hess; Miguel A Andrade-Navarro; Marco Biggiogera; Mark Helm; Matthias Soller; Marc Bühler; Jean-Yves Roignant
Journal:  Genes Dev       Date:  2018-03-13       Impact factor: 11.361

8.  The methyltransferase domain of the Sudan ebolavirus L protein specifically targets internal adenosines of RNA substrates, in addition to the cap structure.

Authors:  Baptiste Martin; Bruno Coutard; Théo Guez; Guido C Paesen; Bruno Canard; Françoise Debart; Jean-Jacques Vasseur; Jonathan M Grimes; Etienne Decroly
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

9.  Characterization of influenza virus variants induced by treatment with the endonuclease inhibitor baloxavir marboxil.

Authors:  Shinya Omoto; Valentina Speranzini; Takashi Hashimoto; Takeshi Noshi; Hiroto Yamaguchi; Makoto Kawai; Keiko Kawaguchi; Takeki Uehara; Takao Shishido; Akira Naito; Stephen Cusack
Journal:  Sci Rep       Date:  2018-06-25       Impact factor: 4.379

10.  N6-methyladenosine regulates PEDV replication and host gene expression.

Authors:  Jianing Chen; Li Jin; Zemei Wang; Liyuan Wang; Qingbo Chen; Yaru Cui; Guangliang Liu
Journal:  Virology       Date:  2020-06-16       Impact factor: 3.616

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  2 in total

1.  Transcriptomic Characterization Reveals Attributes of High Influenza Virus Productivity in MDCK Cells.

Authors:  Qian Ye; Thu Phan; Wei-Shou Hu; Xuping Liu; Li Fan; Wen-Song Tan; Liang Zhao
Journal:  Viruses       Date:  2021-11-01       Impact factor: 5.048

2.  ALKBH3 partner ASCC3 mediates P-body formation and selective clearance of MMS-induced 1-methyladenosine and 3-methylcytosine from mRNA.

Authors:  Kristian Lied Wollen; Lars Hagen; Cathrine B Vågbø; Renana Rabe; Tobias S Iveland; Per Arne Aas; Animesh Sharma; Bjørnar Sporsheim; Hilde O Erlandsen; Vuk Palibrk; Magnar Bjørås; Davi M Fonseca; Nima Mosammaparast; Geir Slupphaug
Journal:  J Transl Med       Date:  2021-07-03       Impact factor: 5.531

  2 in total

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