Literature DB >> 33401250

Construction and analysis of a joint diagnosis model of random forest and artificial neural network for heart failure.

Yuqing Tian1,2, Jiefu Yang2, Ming Lan2, Tong Zou1,2.   

Abstract

Heart failure is a global health problem that affects approximately 26 million people worldwide. As conventional diagnostic techniques for heart failure have been in practice with various limitations, it is necessary to develop novel diagnostic models to supplement existing methods. With advances and improvements in gene sequencing technology in recent years, more heart failure-related genes have been identified. Using existing gene expression data in the Gene Expression Omnibus (GEO) database, we screened differentially expressed genes (DEGs) of heart failure and identified six key genes (HMOX2, SERPINA3, LCN6, CSDC2, FREM1, and ZMAT1) by random forest classifier. Of these genes, CSDC2, FREM1, and ZMAT1 have never been associated with heart failure. We also successfully constructed a new diagnostic model of heart failure using an artificial neural network and verified its diagnostic efficacy in public datasets.

Entities:  

Keywords:  artificial neural network; difference analysis; heart failure; random forest

Mesh:

Substances:

Year:  2020        PMID: 33401250      PMCID: PMC7803554          DOI: 10.18632/aging.202405

Source DB:  PubMed          Journal:  Aging (Albany NY)        ISSN: 1945-4589            Impact factor:   5.682


  33 in total

1.  PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs.

Authors:  T Nastasi; M Scaturro; M Bellafiore; L Raimondi; S Beccari; A Cestelli; I di Liegro
Journal:  J Biol Chem       Date:  1999-08-20       Impact factor: 5.157

2.  Developmental expression of heme oxygenase isozymes in rat brain. Two HO-2 mRNAs are detected.

Authors:  Y Sun; M O Rotenberg; M D Maines
Journal:  J Biol Chem       Date:  1990-05-15       Impact factor: 5.157

3.  Characterization of two constitutive forms of rat liver microsomal heme oxygenase. Only one molecular species of the enzyme is inducible.

Authors:  M D Maines; G M Trakshel; R K Kutty
Journal:  J Biol Chem       Date:  1986-01-05       Impact factor: 5.157

Review 4.  Oxidative stress and heart failure.

Authors:  Hiroyuki Tsutsui; Shintaro Kinugawa; Shouji Matsushima
Journal:  Am J Physiol Heart Circ Physiol       Date:  2011-09-23       Impact factor: 4.733

Review 5.  Heart failure as interstitial cancer: emergence of a malignant fibroblast phenotype.

Authors:  Kelsie E Oatmen; Elizabeth Cull; Francis G Spinale
Journal:  Nat Rev Cardiol       Date:  2019-11-04       Impact factor: 32.419

Review 6.  Impact of Oxidative Stress on the Heart and Vasculature: Part 2 of a 3-Part Series.

Authors:  Thomas Münzel; Giovanni G Camici; Christoph Maack; Nicole R Bonetti; Valentin Fuster; Jason C Kovacic
Journal:  J Am Coll Cardiol       Date:  2017-07-11       Impact factor: 24.094

7.  A Near-Infrared Probe Tracks and Treats Lung Tumor Initiating Cells by Targeting HMOX2.

Authors:  Jong-Jin Kim; Yong-An Lee; Dongdong Su; Jungyeol Lee; Sung-Jin Park; Beomsue Kim; Jia Hui Jane Lee; Xiao Liu; Seong Soon Kim; Myung Ae Bae; Jun-Seok Lee; Seong Cheol Hong; Lu Wang; Animesh Samanta; Haw-Young Kwon; So-Young Choi; Jun-Young Kim; Young Hyun Yu; Hyung-Ho Ha; Zhenxun Wang; Wai Leong Tam; Bing Lim; Nam-Young Kang; Young-Tae Chang
Journal:  J Am Chem Soc       Date:  2019-09-04       Impact factor: 15.419

8.  Heart Failure Stimulates Tumor Growth by Circulating Factors.

Authors:  Wouter C Meijers; Manuel Maglione; Stephan J L Bakker; Rupert Oberhuber; Lyanne M Kieneker; Steven de Jong; Bernhard J Haubner; Wouter B Nagengast; Alexander R Lyon; Bert van der Vegt; Dirk J van Veldhuisen; B Daan Westenbrink; Peter van der Meer; Herman H W Silljé; Rudolf A de Boer
Journal:  Circulation       Date:  2018-08-14       Impact factor: 29.690

Review 9.  Epidemiology and aetiology of heart failure.

Authors:  Boback Ziaeian; Gregg C Fonarow
Journal:  Nat Rev Cardiol       Date:  2016-03-03       Impact factor: 32.419

10.  TILRR, a novel IL-1RI co-receptor, potentiates MyD88 recruitment to control Ras-dependent amplification of NF-kappaB.

Authors:  Xiao Zhang; Freya Shephard; Hong B Kim; Ian R Palmer; Selina McHarg; Gregory J S Fowler; Luke A J O'Neill; Endre Kiss-Toth; Eva E Qwarnstrom
Journal:  J Biol Chem       Date:  2009-11-25       Impact factor: 5.157

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  6 in total

1.  Establishment and Analysis of a Combined Diagnostic Model of Alzheimer's Disease With Random Forest and Artificial Neural Network.

Authors:  Dazhong Sun; Haojun Peng; Zhibing Wu
Journal:  Front Aging Neurosci       Date:  2022-06-30       Impact factor: 5.702

2.  Construction of Novel Gene Signature-Based Predictive Model for the Diagnosis of Acute Myocardial Infarction by Combining Random Forest With Artificial Neural Network.

Authors:  Yanze Wu; Hui Chen; Lei Li; Liuping Zhang; Kai Dai; Tong Wen; Jingtian Peng; Xiaoping Peng; Zeqi Zheng; Ting Jiang; Wenjun Xiong
Journal:  Front Cardiovasc Med       Date:  2022-05-25

3.  The Novel Methylation Biomarker NPY5R Sensitizes Breast Cancer Cells to Chemotherapy.

Authors:  Jiazhou Liu; Xiaoyu Wang; Jiazheng Sun; Yuru Chen; Jie Li; Jing Huang; Huimin Du; Lu Gan; Zhu Qiu; Hongzhong Li; Guosheng Ren; Yuxian Wei
Journal:  Front Cell Dev Biol       Date:  2022-01-11

4.  A Joint Model of Random Forest and Artificial Neural Network for the Diagnosis of Endometriosis.

Authors:  Jiajie She; Danna Su; Ruiying Diao; Liping Wang
Journal:  Front Genet       Date:  2022-03-08       Impact factor: 4.599

5.  Development and validation of immune-based biomarkers and deep learning models for Alzheimer's disease.

Authors:  Yijie He; Lin Cong; Qinfei He; Nianping Feng; Yun Wu
Journal:  Front Genet       Date:  2022-08-22       Impact factor: 4.772

6.  Construction of a neural network diagnostic model and investigation of immune infiltration characteristics for Crohn's disease.

Authors:  Yufei Yang; Lijun Xu; Yuqi Qiao; Tianrong Wang; Qing Zheng
Journal:  Front Genet       Date:  2022-09-15       Impact factor: 4.772

  6 in total

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