Literature DB >> 33399897

Reclassification of Sphaerotilus natans subsp. sulfidivorans Gridneva et al. 2011 as Sphaerotilus sulfidivorans sp. nov. and comparative genome analysis of the genus Sphaerotilus.

Margarita Y Grabovich1, Dmitry D Smolyakov2, Alexey V Beletsky3, Andrey V Mardanov3, Maria V Gureeva2, Nikita D Markov2, Tatyana S Rudenko2, Nikolai V Ravin3.   

Abstract

Filamentous iron oxides accumulating bacteria Sphaerotilus natans subsp. natans and S. natans subsp. sulfidivorans were described as subspecies based on 99.7% identity of their 16S rRNA sequences, in spite of important physiological difference. The ANI between their genomes was 94.7%, which indicate their assignment to different species. S. natans subsp. sulfidivorans and S. montanus possess genes for a complete SOX system, while S. natans subsp. natans encode only SoxYZ. There are genes for the Calvin cycle in the genomes of S. hippei DSM 566T, S. natans subsp. sulfidivorans D-501T, and S. montanus HST. Lithoautotrophy on reduced sulfur compounds is probably possible for S. natans subsp. sulfidivorans and S. montanus, but not for S. natans subsp. natans. Considering significant differences in the genome characteristics and metabolic potential of S. natans subsp. sulfidivorans and S. natans subsp. natans, we propose their classification as different species, S. natans and S. sulfidivorans sp. nov.

Entities:  

Keywords:  AAI; ANI; Digital DDH; Sphaerotilus; Sphaerotilus natans subsp. sulfidivorans; Sphaerotilus sulfidivorans sp. nov.

Year:  2021        PMID: 33399897     DOI: 10.1007/s00203-020-02158-6

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  13 in total

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Journal:  Syst Biol       Date:  2010-03-29       Impact factor: 15.683

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7.  Resolved: child and adolescent psychiatric practice in the twenty-first century will largely be hospital based.

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Journal:  J Bacteriol       Date:  1993-12       Impact factor: 3.490

9.  Taxonomic investigation of representatives of the genus Sphaerotilus: descriptions of Sphaerotilus montanus sp. nov., Sphaerotilus hippei sp. nov., Sphaerotilus natans subsp. natans subsp. nov. and Sphaerotilus natans subsp. sulfidivorans subsp. nov., and an emended description of the genus Sphaerotilus.

Authors:  Elena Gridneva; Elena Chernousova; Galina Dubinina; Vladimir Akimov; Jan Kuever; Ekaterina Detkova; Margarita Grabovich
Journal:  Int J Syst Evol Microbiol       Date:  2010-05-21       Impact factor: 2.747

10.  Complete Genome Sequence and Methylome Analysis of Sphaerotilus natans subsp. sulfidivorans D-507.

Authors:  Alexey Fomenkov; Margarita Grabovich; Elena Belousova; Dmitry Smolyakov; Galina Dubinina; Richard J Roberts
Journal:  Microbiol Resour Announc       Date:  2019-11-14
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