Literature DB >> 33398823

Optogenetics in Caenorhabditis elegans.

Yuki Tsukada1, Ikue Mori2.   

Abstract

With a compact neural circuit consisting of entirely mapped 302 neurons, Caenorhabditis elegans plays an important role in the development and application of optogenetics. Optogenetics in C. elegans offers the opportunity that drastically changes experimental designs with increasing accessibility for neural activity and various cellular processes, thereby accelerating the studies on the functions of neural circuits and multicellular systems. Combining optogenetics with other approaches such as electrophysiology increases the resolution of elucidation. In particular, technologies like patterned illumination specifically developed in combination with optogenetics provide new tools to interrogate neural functions. In this chapter, we introduce the reasons to use optogenetics in C. elegans, and discuss the technical issues raised, especially for C. elegans by revisiting our chapter in the first edition of this book. Throughout the chapter, we review early and recent milestone works using optogenetics to investigate a variety of biological systems including neural and behavioral regulation.

Entities:  

Keywords:  Behavioral analysis; C. elegans; Caenorhabditis elegans; Neural circuit; Patterned illumination; Photo-electrophysiology; Tracking

Year:  2021        PMID: 33398823     DOI: 10.1007/978-981-15-8763-4_20

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  25 in total

1.  Millisecond-timescale, genetically targeted optical control of neural activity.

Authors:  Edward S Boyden; Feng Zhang; Ernst Bamberg; Georg Nagel; Karl Deisseroth
Journal:  Nat Neurosci       Date:  2005-08-14       Impact factor: 24.884

2.  A simple optogenetic system for behavioral analysis of freely moving small animals.

Authors:  Yuya Kawazoe; Hiromu Yawo; Koutarou D Kimura
Journal:  Neurosci Res       Date:  2012-05-18       Impact factor: 3.304

3.  An Upconversion Nanoparticle Enables Near Infrared-Optogenetic Manipulation of the Caenorhabditis elegans Motor Circuit.

Authors:  Yanxiao Ao; Kanghua Zeng; Bin Yu; Yu Miao; Wesley Hung; Zhongzheng Yu; Yanhong Xue; Timothy Thatt Yang Tan; Tao Xu; Mei Zhen; Xiangliang Yang; Yan Zhang; Shangbang Gao
Journal:  ACS Nano       Date:  2019-01-29       Impact factor: 15.881

4.  The AFD sensory neurons encode multiple functions underlying thermotactic behavior in Caenorhabditis elegans.

Authors:  Damon A Clark; David Biron; Piali Sengupta; Aravinthan D T Samuel
Journal:  J Neurosci       Date:  2006-07-12       Impact factor: 6.167

5.  Whole-animal connectomes of both Caenorhabditis elegans sexes.

Authors:  Steven J Cook; Travis A Jarrell; Christopher A Brittin; Yi Wang; Adam E Bloniarz; Maksim A Yakovlev; Ken C Q Nguyen; Leo T-H Tang; Emily A Bayer; Janet S Duerr; Hannes E Bülow; Oliver Hobert; David H Hall; Scott W Emmons
Journal:  Nature       Date:  2019-07-03       Impact factor: 49.962

Review 6.  Optogenetic manipulation of neural activity in C. elegans: from synapse to circuits and behaviour.

Authors:  Steven J Husson; Alexander Gottschalk; Andrew M Leifer
Journal:  Biol Cell       Date:  2013-04-26       Impact factor: 4.458

7.  Optical interrogation of neural circuits in Caenorhabditis elegans.

Authors:  Zengcai V Guo; Anne C Hart; Sharad Ramanathan
Journal:  Nat Methods       Date:  2009-11-08       Impact factor: 28.547

8.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

9.  An image-free opto-mechanical system for creating virtual environments and imaging neuronal activity in freely moving Caenorhabditis elegans.

Authors:  Serge Faumont; Gary Rondeau; Tod R Thiele; Kristy J Lawton; Kathryn E McCormick; Matthew Sottile; Oliver Griesbeck; Ellie S Heckscher; William M Roberts; Chris Q Doe; Shawn R Lockery
Journal:  PLoS One       Date:  2011-09-28       Impact factor: 3.240

10.  Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.

Authors:  Jasper Akerboom; Nicole Carreras Calderón; Lin Tian; Sebastian Wabnig; Matthias Prigge; Johan Tolö; Andrew Gordus; Michael B Orger; Kristen E Severi; John J Macklin; Ronak Patel; Stefan R Pulver; Trevor J Wardill; Elisabeth Fischer; Christina Schüler; Tsai-Wen Chen; Karen S Sarkisyan; Jonathan S Marvin; Cornelia I Bargmann; Douglas S Kim; Sebastian Kügler; Leon Lagnado; Peter Hegemann; Alexander Gottschalk; Eric R Schreiter; Loren L Looger
Journal:  Front Mol Neurosci       Date:  2013-03-04       Impact factor: 5.639

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