Literature DB >> 33398619

Significance of single-cell and spatial transcriptomes in cell biology and toxicology.

Duojiao Wu1, Xiaozhuan Liu2, Jiaqiang Zhang3,4, Li Li5, Xiangdong Wang6.   

Abstract

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Year:  2021        PMID： 33398619     DOI： 10.1007/s10565-020-09576-8

Source DB:  PubMed          Journal:  Cell Biol Toxicol        ISSN： 0742-2091            Impact factor:   6.691


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  9 in total

1.  Cell-cell communication: old mystery and new opportunity.

Authors:  Dongli Song; Dawei Yang; Charles A Powell; Xiangdong Wang
Journal:  Cell Biol Toxicol       Date:  2019-02-27       Impact factor: 6.691

2.  Can single-cell RNA sequencing crack the mystery of cells?

Authors:  William Wang; Danyan Gao; Xiangdong Wang
Journal:  Cell Biol Toxicol       Date:  2017-07-21       Impact factor: 6.691

3.  Spatial transcriptomic analysis of cryosectioned tissue samples with Geo-seq.

Authors:  Jun Chen; Shengbao Suo; Patrick Pl Tam; Jing-Dong J Han; Guangdun Peng; Naihe Jing
Journal:  Nat Protoc       Date:  2017-02-16       Impact factor: 13.491

Review 4.  Using Single-Cell and Spatial Transcriptomes to Understand Stem Cell Lineage Specification During Early Embryo Development.

Authors:  Guangdun Peng; Guizhong Cui; Jincan Ke; Naihe Jing
Journal:  Annu Rev Genomics Hum Genet       Date:  2020-04-27       Impact factor: 8.929

5.  Single-cell biomedicine: roles of single-cell nuclear elements.

Authors:  Yiming Zeng; Xiangdong Wang; Jiaqiang Zhang
Journal:  Cell Biol Toxicol       Date:  2020-02-01       Impact factor: 6.691

6.  Single-Cell Transcriptome Analysis Reveals Disease-Defining T-cell Subsets in the Tumor Microenvironment of Classic Hodgkin Lymphoma.

Authors:  Tomohiro Aoki; Lauren C Chong; Katsuyoshi Takata; Katy Milne; Monirath Hav; Anthony Colombo; Elizabeth A Chavez; Michael Nissen; Xuehai Wang; Tomoko Miyata-Takata; Vivian Lam; Elena Viganò; Bruce W Woolcock; Adèle Telenius; Michael Y Li; Shannon Healy; Chanel Ghesquiere; Daniel Kos; Talia Goodyear; Johanna Veldman; Allen W Zhang; Jubin Kim; Saeed Saberi; Jiarui Ding; Pedro Farinha; Andrew P Weng; Kerry J Savage; David W Scott; Gerald Krystal; Brad H Nelson; Anja Mottok; Akil Merchant; Sohrab P Shah; Christian Steidl
Journal:  Cancer Discov       Date:  2019-12-19       Impact factor: 39.397

7.  A pooled single-cell genetic screen identifies regulatory checkpoints in the continuum of the epithelial-to-mesenchymal transition.

Authors:  José L McFaline-Figueroa; Andrew J Hill; Xiaojie Qiu; Dana Jackson; Jay Shendure; Cole Trapnell
Journal:  Nat Genet       Date:  2019-09-02       Impact factor: 38.330

8.  Combined single-cell and spatial transcriptomics reveal the molecular, cellular and spatial bone marrow niche organization.

Authors:  Chiara Baccin; Jude Al-Sabah; Lars Velten; Patrick M Helbling; Florian Grünschläger; Pablo Hernández-Malmierca; César Nombela-Arrieta; Lars M Steinmetz; Andreas Trumpp; Simon Haas
Journal:  Nat Cell Biol       Date:  2019-12-23       Impact factor: 28.824

9.  High-definition spatial transcriptomics for in situ tissue profiling.

Authors:  Gökcen Eraslan; Fredrik Salmén; Johanna Klughammer; Linnea Stenbeck; Sanja Vickovic; Denis Schapiro; Tarmo Äijö; Richard Bonneau; Ludvig Bergenstråhle; José Fernandéz Navarro; Joshua Gould; Gabriel K Griffin; Åke Borg; Mostafa Ronaghi; Jonas Frisén; Joakim Lundeberg; Aviv Regev; Patrik L Ståhl
Journal:  Nat Methods       Date:  2019-09-09       Impact factor: 28.547
  9 in total
  8 in total

1.  Spatiotemporal molecular medicine: A new era of clinical and translational medicine.

Authors:  Xiangdong Wang; Jia Fan
Journal:  Clin Transl Med       Date:  2021-01

2.  Spatiotemporal molecular imaging is a critical part of spatiotemporal molecular medicine.

Authors:  Xiangdong Wang; Jia Fan
Journal:  Clin Transl Med       Date:  2021-03

3.  ADAMTS19 Suppresses Cell Migration and Invasion by Targeting S100A16 via the NF-κB Pathway in Human Gastric Cancer.

Authors:  Yingming Jiang; Xihu Yu; Yandong Zhao; Jintuan Huang; Tuoyang Li; Hao Chen; Junyi Zhou; Zhenze Huang; Zuli Yang
Journal:  Biomolecules       Date:  2021-04-12

4.  Clinical challenges of tissue preparation for spatial transcriptome.

Authors:  Xiaoxia Liu; Yujia Jiang; Dongli Song; Linlin Zhang; Guang Xu; Rui Hou; Yong Zhang; Jian Chen; Yunfeng Cheng; Longqi Liu; Xun Xu; Gang Chen; Duojiao Wu; Tianxiang Chen; Ao Chen; Xiangdong Wang
Journal:  Clin Transl Med       Date:  2022-01

5.  Can single cell RNA sequencing reshape the clinical biochemistry of hematology: New clusters of circulating blood cells.

Authors:  Hao Fang; Yiming Zeng; Lianzhong Zhang; Chengshui Chen; Charles A Powell; Xiangdong Wang
Journal:  Clin Transl Med       Date:  2021-12

Review 6.  Clinical and translational values of spatial transcriptomics.

Authors:  Linlin Zhang; Dongsheng Chen; Dongli Song; Xiaoxia Liu; Yanan Zhang; Xun Xu; Xiangdong Wang
Journal:  Signal Transduct Target Ther       Date:  2022-04-01

7.  The Translational and Regulatory Development of an Implantable Microdevice for Multiple Drug Sensitivity Measurements in Cancer Patients.

Authors:  Christine Dominas; Sharath Bhagavatula; Elizabeth Stover; Kyle Deans; Cecilia Larocca; Yolanda Colson; Pierpaolo Peruzzi; Adam Kibel; Nobuhiko Hata; Lillian Tsai; Yin Hung; Robert Packard; Oliver Jonas
Journal:  IEEE Trans Biomed Eng       Date:  2021-12-23       Impact factor: 4.538

Review 8.  Different Flavors of Astrocytes: Revising the Origins of Astrocyte Diversity and Epigenetic Signatures to Understand Heterogeneity after Injury.

Authors:  Alejandro Villarreal; Tanja Vogel
Journal:  Int J Mol Sci       Date:  2021-06-26       Impact factor: 5.923
  8 in total

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