Literature DB >> 33398111

Rate volatility and asymmetric segregation diversify mutation burden in cells with mutator alleles.

Ian T Dowsett1, Jessica L Sneeden1, Branden J Olson2,3, Jill McKay-Fleisch1, Emma McAuley1, Scott R Kennedy1, Alan J Herr4.   

Abstract

Mutations that compromise mismatch repair (MMR) or DNA polymerase ε or δ exonuclease domains produce mutator phenotypes capable of fueling cancer evolution. Here, we investigate how combined defects in these pathways expands genetic heterogeneity in cells of the budding yeast, Saccharomyces cerevisiae, using a single-cell resolution approach that tallies all mutations arising from individual divisions. The distribution of replication errors present in mother cells after the initial S-phase was broader than expected for a single uniform mutation rate across all cell divisions, consistent with volatility of the mutator phenotype. The number of mismatches that then segregated to the mother and daughter cells co-varied, suggesting that each division is governed by a different underlying genome-wide mutation rate. The distribution of mutations that individual cells inherit after the second S-phase is further broadened by the sequential actions of semiconservative replication and mitotic segregation of chromosomes. Modeling suggests that this asymmetric segregation may diversify mutation burden in mutator-driven tumors.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33398111      PMCID: PMC7782790          DOI: 10.1038/s42003-020-01544-6

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  39 in total

1.  Mutation selection and the natural history of cancer.

Authors:  J Cairns
Journal:  Nature       Date:  1975-05-15       Impact factor: 49.962

2.  dNTP pool levels modulate mutator phenotypes of error-prone DNA polymerase ε variants.

Authors:  Lindsey N Williams; Lisette Marjavaara; Gary M Knowels; Eric M Schultz; Edward J Fox; Andrei Chabes; Alan J Herr
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-31       Impact factor: 11.205

3.  DNA replication error-induced extinction of diploid yeast.

Authors:  Alan J Herr; Scott R Kennedy; Gary M Knowels; Eric M Schultz; Bradley D Preston
Journal:  Genetics       Date:  2014-01-03       Impact factor: 4.562

Review 4.  Evolutionary dynamics and significance of multiple subclonal mutations in cancer.

Authors:  Robert A Beckman; Lawrence A Loeb
Journal:  DNA Repair (Amst)       Date:  2017-06-09

5.  Polymerase-mediated ultramutagenesis in mice produces diverse cancers with high mutational load.

Authors:  Hao-Dong Li; Ileana Cuevas; Musi Zhang; Changzheng Lu; Md Maksudul Alam; Yang-Xin Fu; M James You; Esra A Akbay; He Zhang; Diego H Castrillon
Journal:  J Clin Invest       Date:  2018-08-20       Impact factor: 14.808

Review 6.  Review of the Lynch syndrome: history, molecular genetics, screening, differential diagnosis, and medicolegal ramifications.

Authors:  H T Lynch; P M Lynch; S J Lanspa; C L Snyder; J F Lynch; C R Boland
Journal:  Clin Genet       Date:  2009-07       Impact factor: 4.438

7.  Genome-wide mapping of sister chromatid exchange events in single yeast cells using Strand-seq.

Authors:  Clémence Claussin; David Porubský; Diana Cj Spierings; Nancy Halsema; Stefan Rentas; Victor Guryev; Peter M Lansdorp; Michael Chang
Journal:  Elife       Date:  2017-12-12       Impact factor: 8.140

8.  Variation of mutational burden in healthy human tissues suggests non-random strand segregation and allows measuring somatic mutation rates.

Authors:  Benjamin Werner; Andrea Sottoriva
Journal:  PLoS Comput Biol       Date:  2018-06-07       Impact factor: 4.475

9.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

10.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.