Literature DB >> 33398053

DNA-protein crosslink proteases in genome stability.

Annamaria Ruggiano1, Kristijan Ramadan2.   

Abstract

Proteins covalently attached to DNA, also known as DNA-protein crosslinks (DPCs), are common and bulky DNA lesions that interfere with DNA replication, repair, transcription and recombination. Research in the past several years indicates that cells possess dedicated enzymes, known as DPC proteases, which digest the protein component of a DPC. Interestingly, DPC proteases also play a role in proteolysis beside DPC repair, such as in degrading excess histones during DNA replication or controlling DNA replication checkpoints. Here, we discuss the importance of DPC proteases in DNA replication, genome stability and their direct link to human diseases and cancer therapy.

Entities:  

Year:  2021        PMID: 33398053      PMCID: PMC7782752          DOI: 10.1038/s42003-020-01539-3

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  114 in total

1.  26 S proteasome-mediated degradation of topoisomerase II cleavable complexes.

Authors:  Y Mao; S D Desai; C Y Ting; J Hwang; L F Liu
Journal:  J Biol Chem       Date:  2001-08-23       Impact factor: 5.157

2.  Proteasome subunit Rpn1 binds ubiquitin-like protein domains.

Authors:  Suzanne Elsasser; Rayappa R Gali; Martin Schwickart; Christopher N Larsen; David S Leggett; Britta Müller; Matthew T Feng; Fabian Tübing; Gunnar A G Dittmar; Daniel Finley
Journal:  Nat Cell Biol       Date:  2002-09       Impact factor: 28.824

3.  Maternal Haploid, a Metalloprotease Enriched at the Largest Satellite Repeat and Essential for Genome Integrity in Drosophila Embryos.

Authors:  Xiaona Tang; Jinguo Cao; Liang Zhang; Yingzi Huang; Qianyi Zhang; Yikang S Rong
Journal:  Genetics       Date:  2017-06-14       Impact factor: 4.562

4.  Homologous recombination but not nucleotide excision repair plays a pivotal role in tolerance of DNA-protein cross-links in mammalian cells.

Authors:  Toshiaki Nakano; Atsushi Katafuchi; Mayumi Matsubara; Hiroaki Terato; Tomohiro Tsuboi; Tasuku Masuda; Takahiro Tatsumoto; Seung Pil Pack; Keisuke Makino; Deborah L Croteau; Bennett Van Houten; Kenta Iijima; Hiroshi Tauchi; Hiroshi Ide
Journal:  J Biol Chem       Date:  2009-08-11       Impact factor: 5.157

Review 5.  Function and evolution of the DNA-protein crosslink proteases Wss1 and SPRTN.

Authors:  Hannah K Reinking; Kay Hofmann; Julian Stingele
Journal:  DNA Repair (Amst)       Date:  2020-02-06

6.  Cdc48/p97 mediates UV-dependent turnover of RNA Pol II.

Authors:  Rati Verma; Robert Oania; Ruihua Fang; Geoffrey T Smith; Raymond J Deshaies
Journal:  Mol Cell       Date:  2011-01-07       Impact factor: 17.970

7.  Spartan deficiency causes accumulation of Topoisomerase 1 cleavage complexes and tumorigenesis.

Authors:  Reeja S Maskey; Karen S Flatten; Cynthia J Sieben; Kevin L Peterson; Darren J Baker; Hyun-Ja Nam; Myoung Shin Kim; Thomas C Smyrk; Yusuke Kojima; Yuka Machida; Annyoceli Santiago; Jan M van Deursen; Scott H Kaufmann; Yuichi J Machida
Journal:  Nucleic Acids Res       Date:  2017-05-05       Impact factor: 16.971

8.  A model of DNA damage response activation at stalled replication forks by SPRTN.

Authors:  Christopher Bruhn; Marco Foiani
Journal:  Nat Commun       Date:  2019-12-12       Impact factor: 14.919

9.  FAM111 protease activity undermines cellular fitness and is amplified by gain-of-function mutations in human disease.

Authors:  Saskia Hoffmann; Satyakrishna Pentakota; Andreas Mund; Peter Haahr; Fabian Coscia; Marta Gallo; Matthias Mann; Nicholas Mi Taylor; Niels Mailand
Journal:  EMBO Rep       Date:  2020-08-09       Impact factor: 8.807

10.  DNA Structure-Specific Cleavage of DNA-Protein Crosslinks by the SPRTN Protease.

Authors:  Hannah K Reinking; Hyun-Seo Kang; Maximilian J Götz; Hao-Yi Li; Anja Kieser; Shubo Zhao; Aleida C Acampora; Pedro Weickert; Evelyn Fessler; Lucas T Jae; Michael Sattler; Julian Stingele
Journal:  Mol Cell       Date:  2020-08-26       Impact factor: 17.970

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  10 in total

1.  FAM111A is dispensable for electrolyte homeostasis in mice.

Authors:  Barnabas P Ilenwabor; Heidi Schigt; Andreas Kompatscher; Caro Bos; Malou Zuidscherwoude; Bram C J van der Eerden; Joost G J Hoenderop; Jeroen H F de Baaij
Journal:  Sci Rep       Date:  2022-06-17       Impact factor: 4.996

Review 2.  Human topoisomerases and their roles in genome stability and organization.

Authors:  Yves Pommier; André Nussenzweig; Shunichi Takeda; Caroline Austin
Journal:  Nat Rev Mol Cell Biol       Date:  2022-02-28       Impact factor: 113.915

3.  The protease SPRTN and SUMOylation coordinate DNA-protein crosslink repair to prevent genome instability.

Authors:  Annamaria Ruggiano; Bruno Vaz; Susan Kilgas; Marta Popović; Gonzalo Rodriguez-Berriguete; Abhay N Singh; Geoff S Higgins; Anne E Kiltie; Kristijan Ramadan
Journal:  Cell Rep       Date:  2021-12-07       Impact factor: 9.423

4.  Human TDP1, APE1 and TREX1 repair 3'-DNA-peptide/protein cross-links arising from abasic sites in vitro.

Authors:  Xiaoying Wei; Zhishuo Wang; Caroline Hinson; Kun Yang
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 19.160

5.  Ubiquitin-directed AAA+ ATPase p97/VCP unfolds stable proteins crosslinked to DNA for proteolysis by SPRTN.

Authors:  Alexander Kröning; Johannes van den Boom; Matthias Kracht; Anja F Kueck; Hemmo Meyer
Journal:  J Biol Chem       Date:  2022-04-22       Impact factor: 5.486

Review 6.  Contribution of proteases to the hallmarks of aging and to age-related neurodegeneration.

Authors:  Mamta Rai; Michelle Curley; Zane Coleman; Fabio Demontis
Journal:  Aging Cell       Date:  2022-03-29       Impact factor: 11.005

Review 7.  Reconsidering the mechanisms of action of PARP inhibitors based on clinical outcomes.

Authors:  Hiroshi Onji; Junko Murai
Journal:  Cancer Sci       Date:  2022-07-16       Impact factor: 6.518

Review 8.  Proposed Cellular Function of the Human FAM111B Protein and Dysregulation in Fibrosis and Cancer.

Authors:  Afolake Arowolo; Moses Malebana; Falone Sunda; Cenza Rhoda
Journal:  Front Oncol       Date:  2022-07-04       Impact factor: 5.738

9.  Specific Treatment Exists for SARS-CoV-2 ARDS.

Authors:  Badar Kanwar; Chul Joong Lee; Jong-Hoon Lee
Journal:  Vaccines (Basel)       Date:  2021-06-10

10.  Enzymatic bypass of an N6-deoxyadenosine DNA-ethylene dibromide-peptide crosslink by translesion DNA polymerases.

Authors:  Pratibha P Ghodke; Gabriela Gonzalez-Vasquez; Hui Wang; Kevin M Johnson; Carl A Sedgeman; F Peter Guengerich
Journal:  J Biol Chem       Date:  2021-02-19       Impact factor: 5.157

  10 in total

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