Literature DB >> 33387174

Effects of conserved Arg20, Glu74 and Asp77 on the structure and function of a tau class glutathione S-transferase in rice.

Xue Yang1,2, Zhihai Wu3, Jie Gao4,5.   

Abstract

KEY MESSAGE: The relative position of domains is critical for enzymatic properties of tau class glutathione S-transferases, and altering the position of linker far away from the active center affects catalytic property. Glutathione S-transferases (GSTs) are a family of phase II detoxification enzymes whose main function is to improve plant resistance to stresses. To understand the structural effects of tau class GSTs on their function, using OsGSTU17 as an example, we predicted the residues involved in the interactions between its domains and linker region. We further detected the structural changes in mutants and the corresponding changes in terms of substrate activity and kinetic parameters. Four pairs of residues, including Ala14 and Trp165, Arg20 and Tyr154, Glu74 and Arg98, Asp77 and Met87, forming hydrogen bonds and salt bridges were found to play important roles in maintaining the relative position between the domains and linker region inside the protein. The hydrogen bond between Trp165 and Ala14 affected the structural stability has been demonstrated in our previous study. The mutant R20A lost almost all catalytic activity. Interestingly, the mutant E74A exhibited a significant decrease in activity towards 7-chloro-4-nitrobenzo-2-oxa-1, 3-diazole, 1-chloro-2, 4-dinitrobenzene and 4-nitrobenzyl chloride, while its activity towards substrate cumene hydroperoxide remained unchanged. Compared with other mutants, the mutant D77A exhibited decreased affinity to its substrates and increased activity towards 1-chloro-2, 4-dinitrobenzene and cumene hydroperoxide, but its thermodynamic stability did not change significantly. The relative position of individual domain was critical for enzymatic properties, and the linker which is far away from the active site could change the enzymatic properties of GSTs via altering the relative position of the individual domain. Our results provide insights into the relationship between structure and function of tau class GSTs.

Entities:  

Keywords:  Activity changes; Domain interaction; Glutathione S-transferases; Linker region; Site-directed mutagenesis; Structural changes

Mesh:

Substances:

Year:  2021        PMID: 33387174     DOI: 10.1007/s11103-020-01099-4

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  35 in total

1.  Roles for stress-inducible lambda glutathione transferases in flavonoid metabolism in plants as identified by ligand fishing.

Authors:  David P Dixon; Robert Edwards
Journal:  J Biol Chem       Date:  2010-09-14       Impact factor: 5.157

2.  Plant glutathione transferases.

Authors:  Robert Edwards; David P Dixon
Journal:  Methods Enzymol       Date:  2005       Impact factor: 1.600

Review 3.  Multiple roles for plant glutathione transferases in xenobiotic detoxification.

Authors:  Ian Cummins; David P Dixon; Stefanie Freitag-Pohl; Mark Skipsey; Robert Edwards
Journal:  Drug Metab Rev       Date:  2011-03-22       Impact factor: 4.518

Review 4.  Structure, catalytic mechanism, and evolution of the glutathione transferases.

Authors:  R N Armstrong
Journal:  Chem Res Toxicol       Date:  1997-01       Impact factor: 3.739

Review 5.  X-ray crystal structures of cytosolic glutathione S-transferases. Implications for protein architecture, substrate recognition and catalytic function.

Authors:  H Dirr; P Reinemer; R Huber
Journal:  Eur J Biochem       Date:  1994-03-15

6.  Crystal structure of Glycine max glutathione transferase in complex with glutathione: investigation of the mechanism operating by the Tau class glutathione transferases.

Authors:  Irene Axarli; Prathusha Dhavala; Anastassios C Papageorgiou; Nikolaos E Labrou
Journal:  Biochem J       Date:  2009-08-13       Impact factor: 3.857

7.  Quantitative analysis of protein far UV circular dichroism spectra by neural networks.

Authors:  G Böhm; R Muhr; R Jaenicke
Journal:  Protein Eng       Date:  1992-04

8.  Investigation of the role of conserved residues Ser13, Asn48 and Pro49 in the catalytic mechanism of the tau class glutathione transferase from Glycine max.

Authors:  Irene Axarli; Christiana Georgiadou; Prathusha Dhavala; Anastassios C Papageorgiou; Nikolaos E Labrou
Journal:  Biochim Biophys Acta       Date:  2009-10-29

9.  Crystallographic and functional characterization of the fluorodifen-inducible glutathione transferase from Glycine max reveals an active site topography suited for diphenylether herbicides and a novel L-site.

Authors:  Irene Axarli; Prathusha Dhavala; Anastassios C Papageorgiou; Nikolaos E Labrou
Journal:  J Mol Biol       Date:  2008-11-06       Impact factor: 5.469

Review 10.  Plant glutathione transferases.

Authors:  David P Dixon; Adrian Lapthorn; Robert Edwards
Journal:  Genome Biol       Date:  2002-02-26       Impact factor: 13.583

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  2 in total

1.  Effects of Site-Directed Mutagenesis of Cysteine on the Structure of Sip Proteins.

Authors:  Lin Wang; Ming-Yue Ding; Jing Wang; Ji-Guo Gao; Rong-Mei Liu; Hai-Tao Li
Journal:  Front Microbiol       Date:  2022-04-29       Impact factor: 6.064

2.  Red Light Regulates the Metabolite Biosynthesis in the Leaves of "Huangjinya" Through Amino Acid and Phenylpropanoid Metabolisms.

Authors:  Qingping Ma; Laichao Song; Zhanhai Niu; Jingshan Li; Yu Wang; Haiwei Sun; Zhihong Ren; Hongxia Zhao; Shangjing Guo; Zhaotang Ding
Journal:  Front Plant Sci       Date:  2022-01-14       Impact factor: 5.753

  2 in total

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