Literature DB >> 33385216

Lung Gene Expression Analysis Web Portal Version 3: Lung-at-a-Glance.

Yina Du1, Weichen Ouyang1, Joseph A Kitzmiller1, Minzhe Guo1, Shuyang Zhao1, Jeffrey A Whitsett1,2, Yan Xu1,2.   

Abstract

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Year:  2021        PMID： 33385216      PMCID： PMC7781007          DOI： 10.1165/rcmb.2020-0308LE

Source DB:  PubMed          Journal:  Am J Respir Cell Mol Biol        ISSN： 1044-1549            Impact factor:   7.748


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  14 in total

1.  A cellular census of human lungs identifies novel cell states in health and in asthma.

Authors:  Felipe A Vieira Braga; Gozde Kar; Marijn Berg; Orestes A Carpaij; Krzysztof Polanski; Lukas M Simon; Sharon Brouwer; Tomás Gomes; Laura Hesse; Jian Jiang; Eirini S Fasouli; Mirjana Efremova; Roser Vento-Tormo; Carlos Talavera-López; Marnix R Jonker; Karen Affleck; Subarna Palit; Paulina M Strzelecka; Helen V Firth; Krishnaa T Mahbubani; Ana Cvejic; Kerstin B Meyer; Kourosh Saeb-Parsy; Marjan Luinge; Corry-Anke Brandsma; Wim Timens; Ilias Angelidis; Maximilian Strunz; Gerard H Koppelman; Antoon J van Oosterhout; Herbert B Schiller; Fabian J Theis; Maarten van den Berge; Martijn C Nawijn; Sarah A Teichmann
Journal:  Nat Med       Date:  2019-06-17       Impact factor: 53.440

2.  Defining the Activated Fibroblast Population in Lung Fibrosis Using Single-Cell Sequencing.

Authors:  Rebecca Peyser; Scott MacDonnell; Yinglin Gao; Luis Cheng; Yong Kim; Theodore Kaplan; Qin Ruan; Yi Wei; Min Ni; Christina Adler; Wen Zhang; Kishor Devalaraja-Narashimha; Justin Grindley; Gabor Halasz; Lori Morton
Journal:  Am J Respir Cell Mol Biol       Date:  2019-07       Impact factor: 6.914

Review 3.  'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung.

Authors:  Yina Du; Minzhe Guo; Jeffrey A Whitsett; Yan Xu
Journal:  Thorax       Date:  2015-06-30       Impact factor: 9.139

4.  Omics and the Search for Blood Biomarkers in Chronic Obstructive Pulmonary Disease. Insights from COPDGene.

Authors:  Elizabeth A Regan; Craig P Hersh; Peter J Castaldi; Dawn L DeMeo; Edwin K Silverman; James D Crapo; Russell P Bowler
Journal:  Am J Respir Cell Mol Biol       Date:  2019-08       Impact factor: 6.914

Review 5.  The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease.

Authors:  Herbert B Schiller; Daniel T Montoro; Lukas M Simon; Emma L Rawlins; Kerstin B Meyer; Maximilian Strunz; Felipe A Vieira Braga; Wim Timens; Gerard H Koppelman; G R Scott Budinger; Janette K Burgess; Avinash Waghray; Maarten van den Berge; Fabian J Theis; Aviv Regev; Naftali Kaminski; Jayaraj Rajagopal; Sarah A Teichmann; Alexander V Misharin; Martijn C Nawijn
Journal:  Am J Respir Cell Mol Biol       Date:  2019-07       Impact factor: 6.914

Review 6.  LungMAP: The Molecular Atlas of Lung Development Program.

Authors:  Maryanne E Ardini-Poleske; Robert F Clark; Charles Ansong; James P Carson; Richard A Corley; Gail H Deutsch; James S Hagood; Naftali Kaminski; Thomas J Mariani; Steven S Potter; Gloria S Pryhuber; David Warburton; Jeffrey A Whitsett; Scott M Palmer; Namasivayam Ambalavanan
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2017-08-10       Impact factor: 5.464

7.  Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development.

Authors:  Yina Du; Joseph A Kitzmiller; Anusha Sridharan; Anne K Perl; James P Bridges; Ravi S Misra; Gloria S Pryhuber; Thomas J Mariani; Soumyaroop Bhattacharya; Minzhe Guo; S Steven Potter; Phillip Dexheimer; Bruce Aronow; Alan H Jobe; Jeffrey A Whitsett; Yan Xu
Journal:  Thorax       Date:  2017-01-09       Impact factor: 9.139

8.  Dissecting the cellular specificity of smoking effects and reconstructing lineages in the human airway epithelium.

Authors:  Katherine C Goldfarbmuren; Nathan D Jackson; Satria P Sajuthi; Nathan Dyjack; Katie S Li; Cydney L Rios; Elizabeth G Plender; Michael T Montgomery; Jamie L Everman; Preston E Bratcher; Eszter K Vladar; Max A Seibold
Journal:  Nat Commun       Date:  2020-05-19       Impact factor: 14.919

9.  Single-cell connectomic analysis of adult mammalian lungs.

Authors:  Micha Sam Brickman Raredon; Taylor Sterling Adams; Yasir Suhail; Jonas Christian Schupp; Sergio Poli; Nir Neumark; Katherine L Leiby; Allison Marie Greaney; Yifan Yuan; Corey Horien; George Linderman; Alexander J Engler; Daniel J Boffa; Yuval Kluger; Ivan O Rosas; Andre Levchenko; Naftali Kaminski; Laura E Niklason
Journal:  Sci Adv       Date:  2019-12-04       Impact factor: 14.136

10.  The Human Cell Atlas.

Authors:  Aviv Regev; Sarah A Teichmann; Eric S Lander; Ido Amit; Christophe Benoist; Ewan Birney; Bernd Bodenmiller; Peter Campbell; Piero Carninci; Menna Clatworthy; Hans Clevers; Bart Deplancke; Ian Dunham; James Eberwine; Roland Eils; Wolfgang Enard; Andrew Farmer; Lars Fugger; Berthold Göttgens; Nir Hacohen; Muzlifah Haniffa; Martin Hemberg; Seung Kim; Paul Klenerman; Arnold Kriegstein; Ed Lein; Sten Linnarsson; Emma Lundberg; Joakim Lundeberg; Partha Majumder; John C Marioni; Miriam Merad; Musa Mhlanga; Martijn Nawijn; Mihai Netea; Garry Nolan; Dana Pe'er; Anthony Phillipakis; Chris P Ponting; Stephen Quake; Wolf Reik; Orit Rozenblatt-Rosen; Joshua Sanes; Rahul Satija; Ton N Schumacher; Alex Shalek; Ehud Shapiro; Padmanee Sharma; Jay W Shin; Oliver Stegle; Michael Stratton; Michael J T Stubbington; Fabian J Theis; Matthias Uhlen; Alexander van Oudenaarden; Allon Wagner; Fiona Watt; Jonathan Weissman; Barbara Wold; Ramnik Xavier; Nir Yosef
Journal:  Elife       Date:  2017-12-05       Impact factor: 8.140
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  2 in total

Review 1.  Racing against time: leveraging preclinical models to understand pulmonary susceptibility to perinatal acetaminophen exposures.

Authors:  David J McCulley; Erik A Jensen; Jennifer M S Sucre; Sarah McKenna; Laura G Sherlock; Evgenia Dobrinskikh; Clyde J Wright
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2022-05-03       Impact factor: 6.011

2.  A single-cell regulatory map of postnatal lung alveologenesis in humans and mice.

Authors:  Thu Elizabeth Duong; Yan Wu; Brandon Chin Sos; Weixiu Dong; Siddharth Limaye; Lauraine H Rivier; Greg Myers; James S Hagood; Kun Zhang
Journal:  Cell Genom       Date:  2022-03-09
  2 in total

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