Literature DB >> 33381557

An Integrated Autophagy-Related Long Noncoding RNA Signature as a Prognostic Biomarker for Human Endometrial Cancer: A Bioinformatics-Based Approach.

Ziwei Wang1, Jun Zhang1, Yan Liu1, Rong Zhao1, Xing Zhou1, Hongbo Wang1.   

Abstract

Endometrial cancer is one of the most common malignant tumors, lowering the quality of life among women worldwide. Autophagy plays dual roles in these malignancies. To search for prognostic markers for endometrial cancer, we mined The Cancer Genome Atlas and the Human Autophagy Database for information on endometrial cancer and autophagy-related genes and identified five autophagy-related long noncoding RNAs (lncRNAs) (LINC01871, SCARNA9, SOS1-IT1, AL161618.1, and FIRRE). Based on these autophagy-related lncRNAs, samples were divided into high-risk and low-risk groups. Survival analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group. Univariate and multivariate independent prognostic analyses showed that patients' age, pathological grade, and FIGO stage were all risk factors for poor prognosis. A clinical correlation analysis of the relationship between the five autophagy-related lncRNAs and patients' age, pathological grade, and FIGO stage was also per https://orcid.org/0000-0001-7090-1750 formed. Histopathological assessment of the tumor microenvironment showed that the ESTIMATE, immune, and stromal scores in the high-risk group were lower than those in the low-risk group. Principal component analysis and functional annotation were performed to confirm the correlations. To further evaluate the effect of the model constructed on prognosis, samples were divided into training (60%) and validation (40%) groups, regarding the risk status as an independent prognostic risk factor. A prognostic nomogram was constructed using patients' age, pathological grade, FIGO stage, and risk status to estimate the patients' survival rate. C-index and multi-index ROC curves were generated to verify the stability and accuracy of the nomogram. From this analysis, we concluded that the five lncRNAs identified in this study could affect the incidence and development of endometrial cancer by regulating the autophagy process. Therefore, these molecules may have the potential to serve as novel therapeutic targets and biomarkers.
Copyright © 2020 Ziwei Wang et al.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 33381557      PMCID: PMC7755467          DOI: 10.1155/2020/5717498

Source DB:  PubMed          Journal:  Biomed Res Int            Impact factor:   3.411


  47 in total

Review 1.  Tumor Microenvironment-Activatable Prodrug Vesicles for Nanoenabled Cancer Chemoimmunotherapy Combining Immunogenic Cell Death Induction and CD47 Blockade.

Authors:  Fangyuan Zhou; Bing Feng; Haijun Yu; Dangge Wang; Tingting Wang; Yuting Ma; Siling Wang; Yaping Li
Journal:  Adv Mater       Date:  2019-02-14       Impact factor: 30.849

Review 2.  Linking Long Noncoding RNA Localization and Function.

Authors:  Ling-Ling Chen
Journal:  Trends Biochem Sci       Date:  2016-08-04       Impact factor: 13.807

3.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

Review 4.  Molecular Pathways: Targeting the CXCR4-CXCL12 Axis--Untapped Potential in the Tumor Microenvironment.

Authors:  Stefania Scala
Journal:  Clin Cancer Res       Date:  2015-07-21       Impact factor: 12.531

5.  PI3K/AKT/mTOR pathway promotes progestin resistance in endometrial cancer cells by inhibition of autophagy.

Authors:  Hua Liu; Liqin Zhang; Xuyan Zhang; Zhumei Cui
Journal:  Onco Targets Ther       Date:  2017-06-06       Impact factor: 4.147

6.  The long noncoding RNA H19 promotes tamoxifen resistance in breast cancer via autophagy.

Authors:  Ji Wang; Shuduo Xie; Jingjing Yang; Hanchu Xiong; Yunlu Jia; Yulu Zhou; Yongxia Chen; Xiaogang Ying; Cong Chen; Chenyang Ye; Linbo Wang; Jichun Zhou
Journal:  J Hematol Oncol       Date:  2019-07-24       Impact factor: 17.388

7.  GAA compound heterozygous mutations associated with autophagic impairment cause cerebral infarction in Pompe disease.

Authors:  Xiaodong Jia; Libin Shao; Chengcheng Liu; Tuanzhi Chen; Ling Peng; Yinguang Cao; Chuanchen Zhang; Xiafeng Yang; Guifeng Zhang; Jianlu Gao; Guangyi Fan; Mingliang Gu; Hongli Du; Zhangyong Xia
Journal:  Aging (Albany NY)       Date:  2020-03-03       Impact factor: 5.682

8.  Hypoxia-induced autophagy drives colorectal cancer initiation and progression by activating the PRKC/PKC-EZR (ezrin) pathway.

Authors:  Komal Qureshi-Baig; Diana Kuhn; Elodie Viry; Vitaly I Pozdeev; Martine Schmitz; Fabien Rodriguez; Pit Ullmann; Eric Koncina; Martin Nurmik; Sonia Frasquilho; Petr V Nazarov; Nikolaus Zuegel; Marc Boulmont; Yervand Karapetyan; Laurent Antunes; Daniel Val; Michel Mittelbronn; Bassam Janji; Serge Haan; Elisabeth Letellier
Journal:  Autophagy       Date:  2019-11-27       Impact factor: 16.016

9.  Age at menarche and endometrial cancer risk: a dose-response meta-analysis of prospective studies.

Authors:  Ting-Ting Gong; Yong-Lai Wang; Xiao-Xin Ma
Journal:  Sci Rep       Date:  2015-09-11       Impact factor: 4.379

10.  Long noncoding RNA HOST2, working as a competitive endogenous RNA, promotes STAT3-mediated cell proliferation and migration via decoying of let-7b in triple-negative breast cancer.

Authors:  Kaiyao Hua; Xiaochong Deng; Jiashu Hu; Changle Ji; Yunhe Yu; Jiayi Li; Xuehui Wang; Lin Fang
Journal:  J Exp Clin Cancer Res       Date:  2020-04-05
View more
  8 in total

1.  A four immune-related long noncoding RNAs signature as predictors for cervical cancer.

Authors:  Min Xu; Runjie Zhang; Jin Qiu
Journal:  Hum Cell       Date:  2021-11-30       Impact factor: 4.174

2.  N6-Methyladenosine-Related Long Noncoding RNAs as Potential Prognosis Biomarkers for Endometrial Cancer.

Authors:  Rui Shi; Ziwei Wang; Jun Zhang; Zhicheng Yu; Lanfen An; Sitian Wei; Dilu Feng; Hongbo Wang
Journal:  Int J Gen Med       Date:  2021-11-16

3.  Long non-coding RNA SOS1-IT1 promotes endometrial cancer progression by regulating hypoxia signaling pathway.

Authors:  Hongyang Liu; Junhu Wan; Quanling Feng; Jingyu Li; Jun Liu; Shihong Cui
Journal:  J Cell Commun Signal       Date:  2021-10-12       Impact factor: 5.908

4.  Inflammation-Related LncRNAs Signature for Prognosis and Immune Response Evaluation in Uterine Corpus Endometrial Carcinoma.

Authors:  Hongmei Gu; Jiahang Song; Yizhang Chen; Yichun Wang; Xiaofang Tan; Hongyu Zhao
Journal:  Front Oncol       Date:  2022-06-02       Impact factor: 5.738

5.  A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer.

Authors:  Diocésio Alves Pinto de Andrade; Luciane Sussuchi da Silva; Ana Carolina Laus; Marcos Alves de Lima; Gustavo Nóriz Berardinelli; Vinicius Duval da Silva; Graziela de Macedo Matsushita; Murilo Bonatelli; Aline Larissa Virginio da Silva; Adriane Feijó Evangelista; Jesus Paula Carvalho; Rui Manuel Reis; Ricardo Dos Reis
Journal:  Front Oncol       Date:  2021-08-17       Impact factor: 6.244

6.  Predicting the Survival and Immune Landscape of Colorectal Cancer Patients Using an Immune-Related lncRNA Pair Model.

Authors:  Chao Ma; Xin Zhang; Xudong Zhao; Nan Zhang; Sixin Zhou; Yonghui Zhang; Peiyu Li
Journal:  Front Genet       Date:  2021-09-06       Impact factor: 4.599

7.  Risk stratification of lung adenocarcinoma using a nomogram combined with ferroptosis-related LncRNAs and subgroup analysis with immune and N6-methyladenosine modification.

Authors:  Chen Gao; Ning Kong; Fan Zhang; Tianyu Tang; Jiaying Li; Honglei Ding; Zhichao Sun; Linyu Wu; Maosheng Xu
Journal:  BMC Med Genomics       Date:  2022-01-29       Impact factor: 3.063

8.  Ferroptosis-related lncRNA signature predicts prognosis and immunotherapy efficacy in cutaneous melanoma.

Authors:  Yujian Xu; Youbai Chen; Zehao Niu; Zheng Yang; Jiahua Xing; Xiangye Yin; Lingli Guo; Qixu Zhang; Yi Yang; Yan Han
Journal:  Front Surg       Date:  2022-07-21
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.