Literature DB >> 33378343

Characterization of lncRNA and mRNA profiles in rats with diabetic macroangiopathy.

Chan Yang1, Ziyan Xie2, Qiangfei Yang3, Min Su2, Ran Yan2, Xueqin Cai2, Xiaoxu Fu2, Hong Gao1, Lian Du4, Wen Zhong1, Chunguang Xie1.   

Abstract

Diabetic macroangiopathy is part of the most common serious complications of diabetes. Previous studies indicate that lncRNAs involved in the process of diabetes and another vascular disease. However, their detailed mechanism of the lncRNAs involved in diabetic macroangiopathy has not been well characterized. In the present study, we generated rat models of diabetic macroangiopathy induced by High fat of 16weeks. A total of 15 GK rats were constructed as a test group, along with 15 Wistar rats set as control group, and thoracic aorta tissue from each group was collected. Whole genomic RNA sequencing was performed on thoracic aorta tissue; 3223 novel lncRNAs and 20367 annotated lncRNAs were indemnified in thoracic aorta samples, and 864 lncRNAs were expressed differently in the test and control groups. Gene ontology term enrichment showed the apparent enrichment of inflammatory response and cell apoptosis, which consistent with the results of H&E Staining, TUNEL Assay, and ELISA; Extensive literature reveals inflammatory response and cell apoptosis play an important role in the process of diabetic macroangiopathy. The results of the present study indicated that lncRNAs, especially Nrep. bSep08, Col5a1, aSep0, soygee.aSep08-unspliced, NONRATT013247.2, votar.aSep08-unspliced, etc, both participate in and mediate the process of inflammatory response, cell apoptosis. What's more. Our research provides further insights into understanding of the basic molecular mechanisms underlying diabetic macroangiopathy.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 33378343      PMCID: PMC7773178          DOI: 10.1371/journal.pone.0243987

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  15 in total

1.  Alternative expression analysis by RNA sequencing.

Authors:  Malachi Griffith; Obi L Griffith; Jill Mwenifumbo; Rodrigo Goya; A Sorana Morrissy; Ryan D Morin; Richard Corbett; Michelle J Tang; Ying-Chen Hou; Trevor J Pugh; Gordon Robertson; Suganthi Chittaranjan; Adrian Ally; Jennifer K Asano; Susanna Y Chan; Haiyan I Li; Helen McDonald; Kevin Teague; Yongjun Zhao; Thomas Zeng; Allen Delaney; Martin Hirst; Gregg B Morin; Steven J M Jones; Isabella T Tai; Marco A Marra
Journal:  Nat Methods       Date:  2010-09-12       Impact factor: 28.547

Review 2.  Potential Role for Dendritic Cells in Endothelial Dysfunction, Diabetes and Cardiovascular Disease.

Authors:  Astrid Parenti; Laura Pala; Sara Paccosi; Carlo Maria Rotella
Journal:  Curr Pharm Des       Date:  2017       Impact factor: 3.116

Review 3.  Diabetic macroangiopathy: Pathogenetic insights and novel therapeutic approaches with focus on high glucose-mediated vascular damage.

Authors:  Rosalinda Madonna; Damiana Pieragostino; Carmela Rita Balistreri; Claudia Rossi; Yong-Jian Geng; Piero Del Boccio; Raffaele De Caterina
Journal:  Vascul Pharmacol       Date:  2018-02-06       Impact factor: 5.773

4.  [Effect of Shenqi compound on PTEN/PI3K signal transduction in GK rats with diabetes mellitus macroangiopathy].

Authors:  Ya Liu; Chun-Guang Xie; Min Chen
Journal:  Zhongguo Zhong Xi Yi Jie He Za Zhi       Date:  2010-06

5.  Report on the workshop on diabetes and mechanisms of atherogenesis. September 17th and 18th, 1992, Bethesda, Maryland.

Authors:  G S Getz
Journal:  Arterioscler Thromb       Date:  1993-03

Review 6.  Long Noncoding RNAs: From Clinical Genetics to Therapeutic Targets?

Authors:  Reinier A Boon; Nicolas Jaé; Lesca Holdt; Stefanie Dimmeler
Journal:  J Am Coll Cardiol       Date:  2016-03-15       Impact factor: 24.094

7.  [Molecular cloning of a novel gene, C5orf21 gene and its roles in diabetic macroangiopathy].

Authors:  Lian-xi Li; Zheng Tao; Xue-hong Dong; Wen-chang Liang; Zhi-hong Yang; Bo Mou; Yu-qian Bao; Chen Wang; Wei-ping Jia; Ren-ming Hu
Journal:  Zhonghua Yi Xue Za Zhi       Date:  2009-09-29

8.  UK Prospective Diabetes Study (UKPDS). X. Urinary albumin excretion over 3 years in diet-treated type 2, (non-insulin-dependent) diabetic patients, and association with hypertension, hyperglycaemia and hypertriglyceridaemia.

Authors: 
Journal:  Diabetologia       Date:  1993-10       Impact factor: 10.122

9.  The 223A>G polymorphism of the leptin receptor gene is associated with macroangiopathy in type 2 diabetes mellitus.

Authors:  Run-Tao Gan; Shu-Sen Yang
Journal:  Mol Biol Rep       Date:  2011-09-22       Impact factor: 2.316

10.  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Authors:  Cole Trapnell; Brian A Williams; Geo Pertea; Ali Mortazavi; Gordon Kwan; Marijke J van Baren; Steven L Salzberg; Barbara J Wold; Lior Pachter
Journal:  Nat Biotechnol       Date:  2010-05-02       Impact factor: 54.908

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.