Literature DB >> 33373193

Influence of DIBMA Polymer Length on Lipid Nanodisc Formation and Membrane Protein Extraction.

Lauren E Ball1, Liam J Riley2,3, Waled Hadasha1, Rueben Pfukwa1, Corinne J I Smith2, Timothy R Dafforn3, Bert Klumperman1.   

Abstract

Polymer-based lipid nanoparticles like styrene-maleic acid lipid particles have revolutionized the study of membrane proteins. More recently, alternative polymers such as poly(diisobutylene-alt-maleic acid) (DIBMA) have been used in this field. DIBMA is commonly synthesized via conventional radical copolymerization. In order to study the influence of its chain length on lipid nanodisc formation and membrane protein extraction, we synthesized DIBMA with molar masses varying from 1.2-12 kDa via RAFT-mediated polymerization. For molar masses in the range of 3-7 kDa, the rate of lipid nanodisc formation was the highest and similar to those of poly(styrene-co-maleic acid) (SMA) and commercially available DIBMA. ZipA solubilization efficiency was significantly higher than for commercially available DIBMA and similar to SMA (circa 75%). Furthermore, RAFT-made DIBMA with a molar mass of 1.2-3.9 kDa showed a much cleaner separation on SDS-PAGE, without the smearing that is typically seen for SMA and commercially available DIBMA.

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Year:  2020        PMID: 33373193     DOI: 10.1021/acs.biomac.0c01538

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  5 in total

1.  Detergent Alternatives: Membrane Protein Purification Using Synthetic Nanodisc Polymers.

Authors:  Valentina S Dimitrova; Saemee Song; Alexandra Karagiaridi; Anika Marand; Heather W Pinkett
Journal:  Methods Mol Biol       Date:  2022

2.  Single-component nanodiscs via the thermal folding of amphiphilic graft copolymers with the adjusted flexibility of the main chain.

Authors:  Tomoki Nishimura; Yusuke Hatatani; Mitsuru Ando; Yoshihiro Sasaki; Kazunari Akiyoshi
Journal:  Chem Sci       Date:  2022-04-19       Impact factor: 9.969

3.  Synthesis and Evaluation of a Library of Alternating Amphipathic Copolymers to Solubilize and Study Membrane Proteins.

Authors:  Adrian H Kopf; Odette Lijding; Barend O W Elenbaas; Martijn C Koorengevel; Justyna M Dobruchowska; Cornelis A van Walree; J Antoinette Killian
Journal:  Biomacromolecules       Date:  2022-01-07       Impact factor: 6.988

Review 4.  Mechanisms of Formation, Structure, and Dynamics of Lipoprotein Discs Stabilized by Amphiphilic Copolymers: A Comprehensive Review.

Authors:  Philipp S Orekhov; Marine E Bozdaganyan; Natalia Voskoboynikova; Armen Y Mulkidjanian; Maria G Karlova; Anna Yudenko; Alina Remeeva; Yury L Ryzhykau; Ivan Gushchin; Valentin I Gordeliy; Olga S Sokolova; Heinz-Jürgen Steinhoff; Mikhail P Kirpichnikov; Konstantin V Shaitan
Journal:  Nanomaterials (Basel)       Date:  2022-01-23       Impact factor: 5.076

Review 5.  Detergent-Free Isolation of Membrane Proteins and Strategies to Study Them in a Near-Native Membrane Environment.

Authors:  Bankala Krishnarjuna; Ayyalusamy Ramamoorthy
Journal:  Biomolecules       Date:  2022-08-04
  5 in total

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