Literature DB >> 33369166

Global Ecological Niche Modeling of Current and Future Distribution of Peste des Petits Ruminants Virus (PPRv) with an Ensemble Modeling Algorithm.

Ayalew Assefa1, Abebe Tibebu1, Amare Bihon2, Mohabaw Yemana3.   

Abstract

Peste des petits ruminants (PPR) is a highly contagious transboundary viral disease of sheep and goats which negatively impacted the livelihood of the farmers and pastoralists in Africa and Asia. To overcome the consequences of the disease, the OIE and FAO are collaborating efforts to eradicate the disease once and for all. In support of this eradication program, we developed a predictive model that delineates suitable territories for the virus globally. To achieve this, we used an ecological niche modeling with an ensemble algorithm. AUC-ROC curve, True Skill Statistics (TSS) and Kappa values were used to evaluate the model's performance. A TSS value greater than 0.7 was used to pool outputs of the nine model. The ensemble model has better performance than individual models by every evaluation metrics (Kappa = 0.82, TSS = 0.88 and ROC = 0.99). Annual minimum temperature (24.92%), annual maximum temperature (21.37%), goat density (18.03%), and solar radiation (14.04%) have the highest overall contribution in the ensemble model. The model indicates that India, Mongolia, Iraq, Iran, Afghanistan, Nepal, Tanzania, Uganda, Kenya, Sudan, Angola, Nigeria, DRC, Ghana, Sierra Leon, Southern Spain, France, Albania, Montenegro, Macedonia, Italy, Armenia, Azerbaijan, are highly suitable for PPRv. In 2040 suitable territories for PPRv will diminish indicating the odds are with us in the eradication process of the disease by 2030. We believe that this model can be used as an epidemiological tool to facilitate the global eradication program of the disease set by the OIE and FAO. This article is protected by copyright. All rights reserved.

Entities:  

Keywords:  Ecological Niche modeling; Ensemble model; Peste des petits ruminants

Year:  2020        PMID: 33369166     DOI: 10.1111/tbed.13967

Source DB:  PubMed          Journal:  Transbound Emerg Dis        ISSN: 1865-1674            Impact factor:   5.005


  5 in total

1.  Modeling of the Potential Geographical Distribution of Three Fritillaria Species Under Climate Change.

Authors:  Ruiping Jiang; Meng Zou; Yu Qin; Guodong Tan; Sipei Huang; Huige Quan; Jiayu Zhou; Hai Liao
Journal:  Front Plant Sci       Date:  2022-01-10       Impact factor: 5.753

2.  Identification of Differential Responses of Goat PBMCs to PPRV Virulence Using a Multi-Omics Approach.

Authors:  Roger-Junior Eloiflin; Gaël Auray; Sylvie Python; Valérie Rodrigues; Martial Seveno; Serge Urbach; Khadija El Koulali; Philippe Holzmuller; Philippe Totte; Genevieve Libeau; Arnaud Bataille; Artur Summerfield
Journal:  Front Immunol       Date:  2021-10-04       Impact factor: 7.561

Review 3.  Peste des Petits Ruminants in Central and Eastern Asia/West Eurasia: Epidemiological Situation and Status of Control and Eradication Activities after the First Phase of the PPR Global Eradication Programme (2017-2021).

Authors:  Matteo Legnardi; Eran Raizman; Daniel Beltran-Alcrudo; Giuseppina Cinardi; Timothy Robinson; Laura C Falzon; Hervé Kapnang Djomgang; Edward Okori; Satya Parida; Felix Njeumi; Camilla T O Benfield
Journal:  Animals (Basel)       Date:  2022-08-10       Impact factor: 3.231

4.  Ecological niche modeling based on ensemble algorithms to predicting current and future potential distribution of African swine fever virus in China.

Authors:  Yue-Peng Li; Xiang Gao; Qi An; Zhuo Sun; Hong-Bin Wang
Journal:  Sci Rep       Date:  2022-09-16       Impact factor: 4.996

Review 5.  Transboundary Animal Diseases, an Overview of 17 Diseases with Potential for Global Spread and Serious Consequences.

Authors:  Elizabeth A Clemmons; Kendra J Alfson; John W Dutton
Journal:  Animals (Basel)       Date:  2021-07-08       Impact factor: 2.752

  5 in total

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