Literature DB >> 33363231

Simple and Visible Detection of Novel Astroviruses Causing Fatal Gout in Goslings Using One-Step Reverse Transcription Polymerase Spiral Reaction Method.

Jun Ji1, Qinxi Chen1, Zhengli Yu1, Xin Xu1, Xinhao Mu1, Xiang Tian1, Xiaoge Fu1, Lunguang Yao1, Yingzuo Bi2, Qingmei Xie2.   

Abstract

In this study, a one-step isothermal method combining polymerase spiral reaction (PSR) with reverse transcription (RT-PSR) was established for rapid and specific detection of novel astroviruses causing fatal gout in goslings (N-GoAstV). The one-step RT-PSR was accomplished at the optimal temperature of 62°C and time of 40 min and used primers simply designed as conventional PCR primers, and the results of detection were visible to the naked eye. The detection limit of PSR was above 34.7 copies/μL at a 95% probability level according to probit regression analysis. The assay specifically detected N-GoAstV, and no other reference viruses were detected. These results suggest that the newly established RT-PSR assay could, in one step, accomplish reverse-transcription, amplification, and result determination providing a visible, convenient, rapid, and cost-effective test that can be carried out onsite, in order to ensure timely quarantine of N-GoAstV-infected birds, leading to effective disease control.
Copyright © 2020 Ji, Chen, Yu, Xu, Mu, Tian, Fu, Yao, Bi and Xie.

Entities:  

Keywords:  N-GoAstV; RT-PSR; rapidity; simplicity; visible detection

Year:  2020        PMID: 33363231      PMCID: PMC7758545          DOI: 10.3389/fvets.2020.579432

Source DB:  PubMed          Journal:  Front Vet Sci        ISSN: 2297-1769


  23 in total

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Journal:  Infect Genet Evol       Date:  2018-10-23       Impact factor: 3.342

2.  A novel group of avian astroviruses in wild aquatic birds.

Authors:  Daniel K W Chu; Connie Y H Leung; Harsha K K Perera; Erica M Ng; Martin Gilbert; Priscilla H Joyner; Alessandro Grioni; Gary Ades; Yi Guan; Joseph S M Peiris; Leo L M Poon
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3.  Genetic characterization of a novel group of avastroviruses in geese.

Authors:  N Liu; M Jiang; Y Dong; X Wang; D Zhang
Journal:  Transbound Emerg Dis       Date:  2018-04-11       Impact factor: 5.005

4.  Characterization and genomic analysis of emerging astroviruses causing fatal gout in goslings.

Authors:  Qinxi Chen; Xin Xu; Zhengli Yu; Chaoge Sui; Kejing Zuo; Guanglin Zhi; Jun Ji; Lunguang Yao; Yunchao Kan; Yingzuo Bi; Qingmei Xie
Journal:  Transbound Emerg Dis       Date:  2019-11-17       Impact factor: 5.005

Review 5.  Human astroviruses.

Authors:  Albert Bosch; Rosa M Pintó; Susana Guix
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

6.  Rapid visual isothermal nucleic acid-based detection assay of Brucella species by polymerase spiral reaction.

Authors:  A Das; B Kumar; S Chakravarti; C Prakash; R P Singh; V Gupta; K P Singh; R K Agrawal; V K Chaturvedi; G Shrinet
Journal:  J Appl Microbiol       Date:  2018-06-27       Impact factor: 3.772

7.  One-Pot Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP) for Detecting MERS-CoV.

Authors:  Se Hee Lee; Yun Hee Baek; Yang-Hoon Kim; Young-Ki Choi; Min-Suk Song; Ji-Young Ahn
Journal:  Front Microbiol       Date:  2017-01-09       Impact factor: 5.640

8.  Establishment and application of a TaqMan-based one-step real-time RT-PCR for the detection of novel goose-origin astrovirus.

Authors:  Dan Yin; Jing Yang; Jiajun Tian; Dalin He; Yi Tang; Youxiang Diao
Journal:  J Virol Methods       Date:  2019-10-24       Impact factor: 2.014

9.  Rapid and visual detection of novel astroviruses causing fatal gout in goslings using one-step reverse transcription loop-mediated isothermal amplification.

Authors:  Jun Ji; Qinxi Chen; Chaoge Sui; Wen Hu; Zhengli Yu; Zhibin Zhang; Xinhao Mu; Xin Xu; Lunguang Yao; Yunchao Kan; Qingmei Xie
Journal:  Poult Sci       Date:  2020-06-20       Impact factor: 3.352

10.  An emerging novel goose astrovirus associated with gosling gout disease, China.

Authors:  Xinyu Zhang; Dan Ren; Tuofan Li; Huayan Zhou; Xiaoyu Liu; Xiaobo Wang; Hao Lu; Wei Gao; Yajuan Wang; Xiaoyan Zou; Huaichang Sun; Jianqiang Ye
Journal:  Emerg Microbes Infect       Date:  2018-09-05       Impact factor: 7.163

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  1 in total

1.  Development of a potential diagnostic monoclonal antibody against capsid spike protein VP27 of the novel goose astrovirus.

Authors:  Miao Zhang; Xuan Lv; Bei Wang; Shengzu Yu; Qi Lu; Ying Kan; Xiqiang Wang; Beiping Jia; Zhuangli Bi; Qing Wang; Yingqi Zhu; Guijun Wang
Journal:  Poult Sci       Date:  2021-12-23       Impact factor: 3.352

  1 in total

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