Literature DB >> 33363103

Mono-Alkylated Ligands Based on Pyrazole and Triazole Derivatives Tested Against Fusarium oxysporum f. sp. albedinis: Synthesis, Characterization, DFT, and Phytase Binding Site Identification Using Blind Docking/Virtual Screening for Potent Fophy Inhibitors.

Yassine Kaddouri1, Farid Abrigach1, Sabir Ouahhoud2, Redouane Benabbes2, Mohamed El Kodadi1,3, Ali Alsalme4, Nabil Al-Zaqri4,5, Ismail Warad6, Rachid Touzani1.   

Abstract

Twelve recent compounds, incorporating several heterocyclic moieties such as pyrazole, thiazole, triazole, and benzotriazole, made in excellent yield up to 37-99.6%. They were tested against Fusarium oxysporum f. sp. albedinis fungi (Bayoud disease), where the best results are for compounds 2, 4, and 5 with IC50 = 18.8-54.4 μg/mL. Density functional theory (DFT) study presented their molecular reactivity, while the docking simulations to describe the synergies between the trained compounds of dataset containing all the tested compounds (57 molecules) and F. oxysporum phytase domain (Fophy) enzyme as biological target. By comparing the results of the docking studies for the Fophy protein, it is found that compound 5 has the best affinity followed by compounds 2 and 4, so there is good agreement with the experimental results where their IC50 values are in the following order: 74.28 (5) < 150 (2) < 214.10 (4), using Blind docking/virtual screening of the homology modeled protein and two different tools as Autodock Vina and Dockthor web tool that gave us predicted sites for further antifungal drug design.
Copyright © 2020 Kaddouri, Abrigach, Ouahhoud, Benabbes, El Kodadi, Alsalme, Al-Zaqri, Warad and Touzani.

Entities:  

Keywords:  DFT; Fusarium oxysporum; antifungal; docking; pyrazole; triazole

Year:  2020        PMID: 33363103      PMCID: PMC7759635          DOI: 10.3389/fchem.2020.559262

Source DB:  PubMed          Journal:  Front Chem        ISSN: 2296-2646            Impact factor:   5.221


  36 in total

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Authors:  Raimund Mannhold; Gennadiy I Poda; Claude Ostermann; Igor V Tetko
Journal:  J Pharm Sci       Date:  2009-03       Impact factor: 3.534

Review 2.  The influence of lipophilicity in drug discovery and design.

Authors:  John A Arnott; Sonia Lobo Planey
Journal:  Expert Opin Drug Discov       Date:  2012-09-19       Impact factor: 6.098

Review 3.  Structure-activity relationship (SAR) study and design strategies of nitrogen-containing heterocyclic moieties for their anticancer activities.

Authors:  Jawaid Akhtar; Ahsan Ahmed Khan; Zulphikar Ali; Rafi Haider; M Shahar Yar
Journal:  Eur J Med Chem       Date:  2016-09-09       Impact factor: 6.514

4.  Highly Flexible Ligand Docking: Benchmarking of the DockThor Program on the LEADS-PEP Protein-Peptide Data Set.

Authors:  Karina B Santos; Isabella A Guedes; Ana L M Karl; Laurent E Dardenne
Journal:  J Chem Inf Model       Date:  2020-01-27       Impact factor: 4.956

5.  SwissADME: a free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules.

Authors:  Antoine Daina; Olivier Michielin; Vincent Zoete
Journal:  Sci Rep       Date:  2017-03-03       Impact factor: 4.379

6.  Assessment of Lipophilicity Indices Derived from Retention Behavior of Antioxidant Compounds in RP-HPLC.

Authors:  Ioana Anamaria Sima; Agata Kot-Wasik; Andrzej Wasik; Jacek Namieśnik; Costel Sârbu
Journal:  Molecules       Date:  2017-03-29       Impact factor: 4.411

7.  Microwave assistant synthesis, antifungal activity and DFT theoretical study of some novel 1,2,4-triazole derivatives containing pyridine moiety.

Authors:  Guo-Xiang Sun; Ming-Yan Yang; Yan-Xia Shi; Zhao-Hui Sun; Xing-Hai Liu; Hong-Ke Wu; Bao-Ju Li; Yong-Gang Zhang
Journal:  Int J Mol Sci       Date:  2014-05-08       Impact factor: 5.923

8.  Synthesis and antioxidant activity evaluation of new compounds from hydrazinecarbothioamide and 1,2,4-triazole class containing diarylsulfone and 2,4-difluorophenyl moieties.

Authors:  Stefania-Felicia Barbuceanu; Diana Carolina Ilies; Gabriel Saramet; Valentina Uivarosi; Constantin Draghici; Valeria Radulescu
Journal:  Int J Mol Sci       Date:  2014-06-17       Impact factor: 5.923

9.  Design and Synthesis of Novel 1,3-Thiazole and 2-Hydrazinyl-1,3-Thiazole Derivatives as Anti-Candida Agents: In Vitro Antifungal Screening, Molecular Docking Study, and Spectroscopic Investigation of their Binding Interaction with Bovine Serum Albumin.

Authors:  Andreea-Iulia Pricopie; Ioana Ionuț; Gabriel Marc; Anca-Maria Arseniu; Laurian Vlase; Adriana Grozav; Luiza Ioana Găină; Dan C Vodnar; Adrian Pîrnău; Brîndușa Tiperciuc; Ovidiu Oniga
Journal:  Molecules       Date:  2019-09-21       Impact factor: 4.411

10.  New thiazole, pyridine and pyrazole derivatives as antioxidant candidates: synthesis, DFT calculations and molecular docking study.

Authors:  Yassine Kaddouri; Farid Abrigach; El Bekaye Yousfi; Mohamed El Kodadi; Rachid Touzani
Journal:  Heliyon       Date:  2020-01-09
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  3 in total

1.  Novel family of bis-pyrazole coordination complexes as potent antibacterial and antifungal agents.

Authors:  Youssef Draoui; Smaail Radi; Amine Tanan; Afaf Oulmidi; Haralampos N Miras; Redouane Benabbes; Sabir Ouahhoudo; Samira Mamri; Aurelian Rotaru; Yann Garcia
Journal:  RSC Adv       Date:  2022-06-15       Impact factor: 4.036

2.  New N-Alkylated Heterocyclic Compounds as Prospective NDM1 Inhibitors: Investigation of In Vitro and In Silico Properties.

Authors:  Yassine Kaddouri; Btissam Bouchal; Farid Abrigach; Mohamed El Kodadi; Mohammed Bellaoui; Ahmed Elkamhawy; Rachid Touzani; Magda H Abdellattif
Journal:  Pharmaceuticals (Basel)       Date:  2022-06-28

3.  Pyrazole, imidazole and triazole: In silico, docking and ADMET studies against SARS-CoV-2.

Authors:  Mounir Mohamed; Farid Abrigach; Sghir El Kadiri; Said Omar Said Hassane; Magda H Abdellattif; Rachid Touzani
Journal:  Mater Today Proc       Date:  2022-09-09
  3 in total

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