Literature DB >> 33362754

Which Current and Novel Diagnostic Avenues for Bacterial Respiratory Diseases?

Héloïse Rytter1,2,3, Anne Jamet1,2,3,4, Mathieu Coureuil1,2,3, Alain Charbit1,2,3, Elodie Ramond1,2,3.   

Abstract

Bacterial acute pneumonia is responsible for an extremely large burden of death worldwide and diagnosis is paramount in the management of patients. While multidrug-resistant bacteria is one of the biggest health threats in the coming decades, clinicians urgently need access to novel diagnostic technologies. In this review, we will first present the already existing and largely used techniques that allow identifying pathogen-associated pneumonia. Then, we will discuss the latest and most promising technological advances that are based on connected technologies (artificial intelligence-based and Omics-based) or rapid tests, to improve the management of lung infections caused by pathogenic bacteria. We also aim to highlight the mutual benefits of fundamental and clinical studies for a better understanding of lung infections and their more efficient diagnostic management.
Copyright © 2020 Rytter, Jamet, Coureuil, Charbit and Ramond.

Entities:  

Keywords:  artificial intelligence; diagnostic test; lung disease (diagnosis); rapid test; respiratory tract infection

Year:  2020        PMID: 33362754      PMCID: PMC7758241          DOI: 10.3389/fmicb.2020.616971

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  76 in total

Review 1.  Optimal sampling sites and methods for detection of pathogens possibly causing community-acquired lower respiratory tract infections.

Authors:  K Loens; L Van Heirstraeten; S Malhotra-Kumar; H Goossens; M Ieven
Journal:  J Clin Microbiol       Date:  2008-11-19       Impact factor: 5.948

2.  C-reactive protein levels in community-acquired pneumonia.

Authors:  E García Vázquez; J A Martínez; J Mensa; F Sánchez; M A Marcos; A de Roux; A Torres
Journal:  Eur Respir J       Date:  2003-04       Impact factor: 16.671

3.  Dendrimeric coating of glass slides for sensitive DNA microarrays analysis.

Authors:  Véronique Le Berre; Emmanuelle Trévisiol; Adilia Dagkessamanskaia; Serguei Sokol; Anne-Marie Caminade; Jean Pierre Majoral; Bernard Meunier; Jean François
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

4.  CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

Authors:  Baofeng Jia; Amogelang R Raphenya; Brian Alcock; Nicholas Waglechner; Peiyao Guo; Kara K Tsang; Briony A Lago; Biren M Dave; Sheldon Pereira; Arjun N Sharma; Sachin Doshi; Mélanie Courtot; Raymond Lo; Laura E Williams; Jonathan G Frye; Tariq Elsayegh; Daim Sardar; Erin L Westman; Andrew C Pawlowski; Timothy A Johnson; Fiona S L Brinkman; Gerard D Wright; Andrew G McArthur
Journal:  Nucleic Acids Res       Date:  2016-10-26       Impact factor: 16.971

5.  Identifying volatile metabolite signatures for the diagnosis of bacterial respiratory tract infection using electronic nose technology: A pilot study.

Authors:  Joseph M Lewis; Richard S Savage; Nicholas J Beeching; Mike B J Beadsworth; Nicholas Feasey; James A Covington
Journal:  PLoS One       Date:  2017-12-18       Impact factor: 3.240

6.  Clinical Evaluation of the Immunochromatographic System Using Silver Amplification for the Rapid Detection of Mycoplasma pneumoniae.

Authors:  Ho Namkoong; Masahiko Yamazaki; Masami Ishizaki; Ikumi Endo; Noriaki Harada; Megumi Aramaki; Yuko Tanaka; Sachiko Kaburagi; Masataka Ichikawa; Takanori Ohata; Shinji Sakaguchi; Fumitake Saito; Ayumi Nakao; Hideki Yuki; Keiko Mitamura
Journal:  Sci Rep       Date:  2018-01-23       Impact factor: 4.379

Review 7.  Rapid molecular assays for detection of tuberculosis.

Authors:  Rkia Eddabra; Hassan Ait Benhassou
Journal:  Pneumonia (Nathan)       Date:  2018-05-25

Review 8.  Procalcitonin in respiratory disease: use as a biomarker for diagnosis and guiding antibiotic therapy.

Authors:  Andrew W Creamer; Alice E Kent; Maha Albur
Journal:  Breathe (Sheff)       Date:  2019-12

9.  Metagenomics Reveals a Core Macrolide Resistome Related to Microbiota in Chronic Respiratory Disease.

Authors:  Micheál Mac Aogáin; Kenny J X Lau; Zhao Cai; Jayanth Kumar Narayana; Rikky W Purbojati; Daniela I Drautz-Moses; Nicolas E Gaultier; Tavleen K Jaggi; Pei Yee Tiew; Thun How Ong; Mariko Siyue Koh; Albert Lim Yick Hou; John A Abisheganaden; Krasimira Tsaneva-Atanasova; Stephan C Schuster; Sanjay H Chotirmall
Journal:  Am J Respir Crit Care Med       Date:  2020-08-01       Impact factor: 21.405

10.  Estimates of the global, regional, and national morbidity, mortality, and aetiologies of lower respiratory infections in 195 countries, 1990-2016: a systematic analysis for the Global Burden of Disease Study 2016.

Authors: 
Journal:  Lancet Infect Dis       Date:  2018-09-19       Impact factor: 71.421

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  3 in total

Review 1.  Advances in diagnostic tools for respiratory tract infections: from tuberculosis to COVID-19 - changing paradigms?

Authors:  Zoran Stojanovic; Filipe Gonçalves-Carvalho; Alicia Marín; Jorge Abad Capa; Jose Domínguez; Irene Latorre; Alicia Lacoma; Cristina Prat-Aymerich
Journal:  ERJ Open Res       Date:  2022-09-12

2.  Utility and Applicability of Rapid Diagnostic Testing in Antimicrobial Stewardship in the Asia-Pacific Region: A Delphi Consensus.

Authors:  Anucha Apisarnthanarak; Hong Bin Kim; Luke S P Moore; Yonghong Xiao; Sanjeev Singh; Yohei Doi; Andrea Lay-Hoon Kwa; Sasheela Sri La Sri Ponnampalavanar; Qing Cao; Shin-Woo Kim; Hyukmin Lee; Pitak Santanirand
Journal:  Clin Infect Dis       Date:  2022-06-10       Impact factor: 20.999

3.  Multiple diagnostic methods for mucormycosis: A retrospective case series.

Authors:  JiaXin Wang; YaoMin Wang; Fei Han; JiangHua Chen
Journal:  J Clin Lab Anal       Date:  2022-07-06       Impact factor: 3.124

  3 in total

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