Literature DB >> 33357399

Phase Separation as a Missing Mechanism for Interpretation of Disease Mutations.

Brian Tsang1, Iva Pritišanac2, Stephen W Scherer3, Alan M Moses4, Julie D Forman-Kay5.   

Abstract

It is unclear how disease mutations impact intrinsically disordered protein regions (IDRs), which lack a stable folded structure. These mutations, while prevalent in disease, are frequently neglected or annotated as variants of unknown significance. Biomolecular phase separation, a physical process often mediated by IDRs, has increasingly appreciated roles in cellular organization and regulation. We find that autism spectrum disorder (ASD)- and cancer-associated proteins are enriched for predicted phase separation propensities, suggesting that IDR mutations disrupt phase separation in key cellular processes. More generally, we hypothesize that combinations of small-effect IDR mutations perturb phase separation, potentially contributing to "missing heritability" in complex disease susceptibility.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Phase separation; autism spectrum disorder; biomolecular condensates; cancer; intrinsic disorder; intrinsically disordered protein regions; neurodevelopment

Mesh:

Substances:

Year:  2020        PMID: 33357399     DOI: 10.1016/j.cell.2020.11.050

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  31 in total

1.  An intrinsically disordered pathological prion variant Y145Stop converts into self-seeding amyloids via liquid-liquid phase separation.

Authors:  Aishwarya Agarwal; Sandeep K Rai; Anamika Avni; Samrat Mukhopadhyay
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-09       Impact factor: 11.205

2.  Genetic variation associated with condensate dysregulation in disease.

Authors:  Salman F Banani; Lena K Afeyan; Susana W Hawken; Jonathan E Henninger; Alessandra Dall'Agnese; Victoria E Clark; Jesse M Platt; Ozgur Oksuz; Nancy M Hannett; Ido Sagi; Tong Ihn Lee; Richard A Young
Journal:  Dev Cell       Date:  2022-07-08       Impact factor: 13.417

Review 3.  Biomolecular Condensation: A New Phase in Cancer Research.

Authors:  Anupam K Chakravarty; Daniel J McGrail; Thomas M Lozanoski; Brandon S Dunn; David J H Shih; Kara M Cirillo; Sueda H Cetinkaya; Wenjin Jim Zheng; Gordon B Mills; S Stephen Yi; Daniel F Jarosz; Nidhi Sahni
Journal:  Cancer Discov       Date:  2022-09-02       Impact factor: 38.272

Review 4.  Transcriptional enhancers at 40: evolution of a viral DNA element to nuclear architectural structures.

Authors:  Sreejith J Nair; Tom Suter; Susan Wang; Lu Yang; Feng Yang; Michael G Rosenfeld
Journal:  Trends Genet       Date:  2022-07-07       Impact factor: 11.821

5.  cGAS phase separation inhibits TREX1-mediated DNA degradation and enhances cytosolic DNA sensing.

Authors:  Wen Zhou; Lisa Mohr; John Maciejowski; Philip J Kranzusch
Journal:  Mol Cell       Date:  2021-02-18       Impact factor: 17.970

Review 6.  Merging Established Mechanisms with New Insights: Condensates, Hubs, and the Regulation of RNA Polymerase II Transcription.

Authors:  Megan Palacio; Dylan J Taatjes
Journal:  J Mol Biol       Date:  2021-08-30       Impact factor: 5.469

7.  On the specificity of protein-protein interactions in the context of disorder.

Authors:  Kaare Teilum; Johan G Olsen; Birthe B Kragelund
Journal:  Biochem J       Date:  2021-06-11       Impact factor: 3.857

Review 8.  Role of Liquid-Liquid Separation in Endocrine and Living Cells.

Authors:  Kazuhisa Akiba; Yuko Katoh-Fukui; Kei Yoshida; Satoshi Narumi; Mami Miyado; Yukihiro Hasegawa; Maki Fukami
Journal:  J Endocr Soc       Date:  2021-07-19

9.  NAP1L1 and NAP1L4 Binding to Hypervariable Domain of Chikungunya Virus nsP3 Protein Is Bivalent and Requires Phosphorylation.

Authors:  Francisco Dominguez; Nikita Shiliaev; Tetyana Lukash; Peter Agback; Oksana Palchevska; Joseph R Gould; Chetan D Meshram; Peter E Prevelige; Todd J Green; Tatiana Agback; Elena I Frolova; Ilya Frolov
Journal:  J Virol       Date:  2021-07-26       Impact factor: 5.103

Review 10.  Higher-order organization of biomolecular condensates.

Authors:  Charlotte M Fare; Alexis Villani; Lauren E Drake; James Shorter
Journal:  Open Biol       Date:  2021-06-16       Impact factor: 6.411

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