Literature DB >> 33353505

Assessing model mismatch and model selection in a Bayesian uncertainty quantification analysis of a fluid-dynamics model of pulmonary blood circulation.

L Mihaela Paun1, Mitchel J Colebank2, Mette S Olufsen2, Nicholas A Hill1, Dirk Husmeier1.   

Abstract

This study uses Bayesian inference to quantify the uncertainty of model parameters and haemodynamic predictions in a one-dimensional pulmonary circulation model based on an integration of mouse haemodynamic and micro-computed tomography imaging data. We emphasize an often neglected, though important source of uncertainty: in the mathematical model form due to the discrepancy between the model and the reality, and in the measurements due to the wrong noise model (jointly called 'model mismatch'). We demonstrate that minimizing the mean squared error between the measured and the predicted data (the conventional method) in the presence of model mismatch leads to biased and overly confident parameter estimates and haemodynamic predictions. We show that our proposed method allowing for model mismatch, which we represent with Gaussian processes, corrects the bias. Additionally, we compare a linear and a nonlinear wall model, as well as models with different vessel stiffness relations. We use formal model selection analysis based on the Watanabe Akaike information criterion to select the model that best predicts the pulmonary haemodynamics. Results show that the nonlinear pressure-area relationship with stiffness dependent on the unstressed radius predicts best the data measured in a control mouse.

Entities:  

Keywords:  Gaussian processes; MCMC; model mismatch; model selection; pulmonary circulation; uncertainty quantification

Mesh:

Year:  2020        PMID: 33353505      PMCID: PMC7811590          DOI: 10.1098/rsif.2020.0886

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  34 in total

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Review 5.  Pulmonary vascular remodeling in pulmonary hypertension.

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6.  MRI model-based non-invasive differential diagnosis in pulmonary hypertension.

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  2 in total

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