Literature DB >> 33349346

Diagnostics in the Time of Coronavirus Disease 2019 (COVID-19): Challenges and Opportunities.

Barbara Zehnbauer1.   

Abstract

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Year:  2021        PMID: 33349346      PMCID: PMC7747673          DOI: 10.1016/j.jmoldx.2020.10.012

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


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Welcome to a new year and congratulations on surviving 2020. The demands for disease identification during this pandemic have brought an unprecedented focus on clinical laboratory diagnostic testing. Despite early shared data about the viral sequence, the rapid pace of changing knowledge about coronavirus disease 2019 (COVID-19) prevalence, transmission, symptoms, pathology, test implementation, and potential treatment options increased awareness around the globe of the value of professional communication and collaborations. Missteps were many and assigned to various sectors. Faulty test kits, restrictions of testing sites, limited clinical criteria to define patients eligible to receive testing, conflicting messages from health professionals and government policy makers, regulatory restrictions, compromised supply chains, and garbled public health messaging affected some countries more than others. These complexities produced scientific knowledge gaps about how to best combat the spread of the virus and protect the most vulnerable populations. The Journal of Molecular Diagnostics (JMD) provided insights from many of our professional colleagues. Dr. Karen Kaul proposed a future framework for collaboration and oversight for better laboratory preparedness during a pandemic. Lefferts et al described the experiences of the Dartmouth group for implementation of the Emergency Use Authorization requirements for diagnostic laboratory-developed procedures as initially specified by the US Food and Drug Administration. The leadership of the Association for Molecular Pathology (AMP) Infectious Disease Subdivision documented their perspectives about the multiple challenges for molecular diagnostic laboratories in effective responses to testing for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The Journal began publishing multiple reports of emerging technologies for detection of SARS-CoV-2 in the June issue,4, 5, 6 and the January issue features three new articles related to COVID-19 detection.7, 8, 9 The editorial office continues to process new COVID-19 manuscripts through the peer review and revision process and looks forward to sharing the lessons, expertise, insights, and encouragement through published reports and social media platforms. Distributing timely information, knowledge, and experiences to our global molecular diagnostics community through JMD during this pandemic tested our editorial processes. Fortunately, the production of the journal was largely unaffected. Journal staff quickly adapted to successfully manage all journal operations remotely. Editors responded to the increased urgency for decisions affecting submissions focused on SARS-CoV-2 testing. The biggest challenge for rapid publishing was finding subject matter experts to provide timely peer reviews at a time when many experts were overwhelmed with laboratory services supporting care of patients with suspected COVID-19. Many of the submitted articles in JMD for 2020 related to SARS-CoV-2, but our other specialty areas of molecular diagnostics for cancer and inherited disorder were also well represented. One year ago, JMD transitioned to a monthly publishing format. Initial concerns about having sufficient articles for each issue proved to be unwarranted as both new submission numbers as well as the number of accepted articles in 2020 significantly surpassed the totals from 2019. The JMD impact factor realized a significant increase last summer, increasing to 5.552 (from 4.426). In 2020, Elsevier initiated publication discounts for AMP members publishing in JMD. These include page charges of $75 for AMP members and $100 for nonmembers plus Open Access charges of $2400 and $3000 for AMP members and nonmembers, respectively. We hope that these incentives, in addition to the reduced time intervals between acceptance and print publication, will encourage AMP members to send their manuscripts to JMD. In 2020, JMD also began a partnership with the newly structured AMP Publications Committee to replace the previous Joint Journal Oversight Committee. JMD editorial staff members contribute to the monthly publications committee conference calls. They collaborated to generate, distribute, and analyze data from a survey of AMP members to ascertain how JMD serves their professional needs. An in-depth report of the findings has been shared with the AMP leadership and the JMD Editorial Board to guide future developments for journal strategies, topics, and formats. While the world remains hopeful that safe and effective vaccines for SARS-CoV-2 will soon be available, future disease outbreaks will require our continued focus and action. The opportunities to demonstrate the strength and value of clinical laboratories, public health measures, and science itself should not be ignored. Leadership and responsible policy must be based in scientific and medical knowledge but tempered with reliable communication and compassionate support of at-risk populations. JMD will strive to publish high-quality studies in molecular medicine, diagnostic technologies, and professional practices guidance, and continue to disseminate timely peer-reviewed articles to combat the ongoing pandemic.
  9 in total

1.  Laboratories and Pandemic Preparedness: A Framework for Collaboration and Oversight.

Authors:  Karen L Kaul
Journal:  J Mol Diagn       Date:  2020-05-16       Impact factor: 5.568

Review 2.  Responding to the Challenges of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2): Perspectives from the Association for Molecular Pathology Infectious Disease Subdivision Leadership.

Authors:  Frederick S Nolte; N Esther Babady; Blake W Buchan; Gerald A Capraro; Erin H Graf; Amy L Leber; Erin McElvania; Joseph D C Yao
Journal:  J Mol Diagn       Date:  2020-06-19       Impact factor: 5.568

3.  Development of Reverse Transcription Loop-Mediated Isothermal Amplification Assays Targeting Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2).

Authors:  Gun-Soo Park; Keunbon Ku; Seung-Hwa Baek; Seong-Jun Kim; Seung Il Kim; Bum-Tae Kim; Jin-Soo Maeng
Journal:  J Mol Diagn       Date:  2020-04-07       Impact factor: 5.568

4.  Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Is Comparable in Clinical Samples Preserved in Saline or Viral Transport Medium.

Authors:  Jared Radbel; Sugeet Jagpal; Jason Roy; Andrew Brooks; Jay Tischfield; Michael Sheldon; Christian Bixby; Dana Witt; Maria L Gennaro; Daniel B Horton; Emily S Barrett; Jeffrey L Carson; Reynold A Panettieri; Martin J Blaser
Journal:  J Mol Diagn       Date:  2020-05-13       Impact factor: 5.568

Review 5.  Implementation of an Emergency Use Authorization Test During an Impending National Crisis.

Authors:  Joel A Lefferts; Edward J Gutmann; Isabella W Martin; Wendy A Wells; Gregory J Tsongalis
Journal:  J Mol Diagn       Date:  2020-05-14       Impact factor: 5.568

6.  Proposal of RT-PCR-Based Mass Population Screening for Severe Acute Respiratory Syndrome Coronavirus 2 (Coronavirus Disease 2019).

Authors:  Nikhil S Sahajpal; Ashis K Mondal; Allan Njau; Sudha Ananth; Kimya Jones; Pankaj K Ahluwalia; Meenakshi Ahluwalia; Yasmeen Jilani; Alka Chaubey; Madhuri Hegde; Vamsi Kota; Amyn Rojiani; Ravindra Kolhe
Journal:  J Mol Diagn       Date:  2020-07-30       Impact factor: 5.568

7.  Performance of Severe Acute Respiratory Syndrome Coronavirus 2 Real-Time RT-PCR Tests on Oral Rinses and Saliva Samples.

Authors:  N Esther Babady; Tracy McMillen; Krupa Jani; Agnes Viale; Elizabeth V Robilotti; Anoshe Aslam; Maureen Diver; Desiree Sokoli; Greg Mason; Monika K Shah; Deborah Korenstein; Mini Kamboj
Journal:  J Mol Diagn       Date:  2020-11-17       Impact factor: 5.568

8.  External Quality Assessment for Molecular Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Clinical Laboratories.

Authors:  Zhe Wang; Yuqing Chen; Jing Yang; Yanxi Han; Jiping Shi; Shaohua Zhan; Rongxue Peng; Rui Li; Runling Zhang; Jinming Li; Rui Zhang
Journal:  J Mol Diagn       Date:  2020-10-26       Impact factor: 5.568

9.  Dynamics of Blood Viral Load Is Strongly Associated with Clinical Outcomes in Coronavirus Disease 2019 (COVID-19) Patients: A Prospective Cohort Study.

Authors:  Liting Chen; Gaoxiang Wang; Xiaolu Long; Hongyan Hou; Jia Wei; Yang Cao; Jiaqi Tan; Weiyong Liu; Liang Huang; Fankai Meng; Lifang Huang; Na Wang; Jianping Zhao; Gang Huang; Ziyong Sun; Wei Wang; Jianfeng Zhou
Journal:  J Mol Diagn       Date:  2020-10-26       Impact factor: 5.568

  9 in total
  2 in total

1.  RT-PCR/MALDI-TOF mass spectrometry-based detection of SARS-CoV-2 in saliva specimens.

Authors:  Matthew M Hernandez; Radhika Banu; Paras Shrestha; Armi Patel; Feng Chen; Liyong Cao; Shelcie Fabre; Jessica Tan; Heidi Lopez; Numthip Chiu; Biana Shifrin; Inessa Zapolskaya; Vanessa Flores; Pui Yiu Lee; Sergio Castañeda; Juan David Ramírez; Jeffrey Jhang; Giuliana Osorio; Melissa R Gitman; Michael D Nowak; David L Reich; Carlos Cordon-Cardo; Emilia Mia Sordillo; Alberto E Paniz-Mondolfi
Journal:  J Med Virol       Date:  2021-05-19       Impact factor: 20.693

2.  SARS-CoV-2 Detection Using Optical Fiber Based Sensor Method.

Authors:  Muhammad Usman Hadi; Menal Khurshid
Journal:  Sensors (Basel)       Date:  2022-01-19       Impact factor: 3.576

  2 in total

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