Literature DB >> 33345258

Riemannian Regression and Classification Models of Brain Networks Applied to Autism.

Eleanor Wong1, Jeffrey S Anderson1, Brandon A Zielinski1, P Thomas Fletcher1.   

Abstract

Functional connectivity from resting-state functional MRI (rsfMRI) is typically represented as a symmetric positive definite (SPD) matrix. Analysis methods that exploit the Riemannian geometry of SPD matrices appropriately adhere to the positive definite constraint, unlike Euclidean methods. Recently proposed approaches for rsfMRI analysis have achieved high accuracy on public datasets, but are computationally intensive and difficult to interpret. In this paper, we show that we can get comparable results using connectivity matrices under the log-Euclidean and affine-invariant Riemannian metrics with relatively simple and interpretable models. On ABIDE Preprocessed dataset, our methods classify autism versus control subjects with 71.1% accuracy. We also show that Riemannian methods beat baseline in regressing connectome features to subject autism severity scores.

Entities:  

Year:  2018        PMID: 33345258      PMCID: PMC7749519          DOI: 10.1007/978-3-030-00755-3_9

Source DB:  PubMed          Journal:  Connect Neuroimaging (2018)


  14 in total

1.  Log-Euclidean metrics for fast and simple calculus on diffusion tensors.

Authors:  Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache
Journal:  Magn Reson Med       Date:  2006-08       Impact factor: 4.668

2.  Detection of brain functional-connectivity difference in post-stroke patients using group-level covariance modeling.

Authors:  Gaël Varoquaux; Flore Baronnet; Andreas Kleinschmidt; Pierre Fillard; Bertrand Thirion
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

3.  Correspondence of the brain's functional architecture during activation and rest.

Authors:  Stephen M Smith; Peter T Fox; Karla L Miller; David C Glahn; P Mickle Fox; Clare E Mackay; Nicola Filippini; Kate E Watkins; Roberto Toro; Angela R Laird; Christian F Beckmann
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-20       Impact factor: 11.205

4.  Transport on Riemannian manifold for functional connectivity-based classification.

Authors:  Bernard Ng; Martin Dressler; Gaël Varoquaux; Jean Baptiste Poline; Michael Greicius; Bertrand Thirion
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

5.  Regression Models on Riemannian Symmetric Spaces.

Authors:  Emil Cornea; Hongtu Zhu; Peter Kim; Joseph G Ibrahim
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2016-03-20       Impact factor: 4.488

6.  Alterations of resting state functional connectivity in the default network in adolescents with autism spectrum disorders.

Authors:  Shih-Jen Weng; Jillian Lee Wiggins; Scott J Peltier; Melisa Carrasco; Susan Risi; Catherine Lord; Christopher S Monk
Journal:  Brain Res       Date:  2009-12-11       Impact factor: 3.252

7.  Abnormal functional connectivity of default mode sub-networks in autism spectrum disorder patients.

Authors:  Michal Assaf; Kanchana Jagannathan; Vince D Calhoun; Laura Miller; Michael C Stevens; Robert Sahl; Jacqueline G O'Boyle; Robert T Schultz; Godfrey D Pearlson
Journal:  Neuroimage       Date:  2010-06-02       Impact factor: 6.556

8.  Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example.

Authors:  Alexandre Abraham; Michael P Milham; Adriana Di Martino; R Cameron Craddock; Dimitris Samaras; Bertrand Thirion; Gael Varoquaux
Journal:  Neuroimage       Date:  2016-11-16       Impact factor: 7.400

9.  Default mode network segregation and social deficits in autism spectrum disorder: Evidence from non-medicated children.

Authors:  Benjamin E Yerys; Evan M Gordon; Danielle N Abrams; Theodore D Satterthwaite; Rachel Weinblatt; Kathryn F Jankowski; John Strang; Lauren Kenworthy; William D Gaillard; Chandan J Vaidya
Journal:  Neuroimage Clin       Date:  2015-08-18       Impact factor: 4.881

10.  Identification of autism spectrum disorder using deep learning and the ABIDE dataset.

Authors:  Anibal Sólon Heinsfeld; Alexandre Rosa Franco; R Cameron Craddock; Augusto Buchweitz; Felipe Meneguzzi
Journal:  Neuroimage Clin       Date:  2017-08-30       Impact factor: 4.881

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  1 in total

1.  rs-fMRI and machine learning for ASD diagnosis: a systematic review and meta-analysis.

Authors:  Caio Pinheiro Santana; Emerson Assis de Carvalho; Igor Duarte Rodrigues; Guilherme Sousa Bastos; Adler Diniz de Souza; Lucelmo Lacerda de Brito
Journal:  Sci Rep       Date:  2022-04-11       Impact factor: 4.379

  1 in total

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